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Report for CCDS34032.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34032.1 Public Homo sapiens 4 ADH4 24 110 108 CCDS HistoryNCBI Gene:127Re-query CCDS DB by CCDS ID:34032.1Re-query CCDS DB by GeneID:127See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34032.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000265512.12 ENSP00000265512.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000265512.12Link to Ensembl Protein Viewer:ENSP00000265512.7Re-query CCDS DB by Nucleotide ID:ENST00000265512Re-query CCDS DB by Protein ID:ENSP00000265512
Original member Current member NCBI NM_000670.5 NP_000661.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000670.5Link to Protein Sequence:NP_000661.2Re-query CCDS DB by Nucleotide ID:NM_000670Re-query CCDS DB by Protein ID:NP_000661Link to BLAST:NP_000661.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000661.2 380 P08319-1 380 100% 0 0

Chromosomal Locations for CCDS 34032.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 99124442 99124466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 99126594 99126732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 99127209 99127344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 99131504 99131764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 99136466 99136697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 99139061 99139148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 99141541 99141682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 99142679 99142780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 99144205 99144222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1143 nt):
ATGGGCACCAAGGGCAAAGTTATTAAATGCAAAGCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCA
TTGAAGAGGTTGAAGTAGCTCCCCCCAAGGCTCATGAAGTTCGCATTCAGATCATTGCTACCTCTCTGTG
CCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGGCCTAGCTTTCCCAGTGATCGTTGGCCATGAG
GCTGCAGGTATTGTGGAAAGTATTGGGCCAGGAGTGACCAACGTCAAACCAGGTGACAAAGTAATTCCAC
TTTATGCACCTCTATGTAGAAAATGCAAGTTTTGTCTGAGTCCACTCACAAATTTGTGTGGGAAAATCAG
TAATCTCAAAAGTCCTGCTAGTGATCAACAACTAATGGAAGACAAAACCAGCAGGTTTACCTGCAAAGGA
AAACCAGTTTACCATTTCTTTGGAACCAGTACATTCTCTCAGTACACTGTGGTGTCAGATATCAATCTTG
CCAAAATAGATGATGATGCAAATTTAGAGAGAGTTTGTCTGCTTGGATGTGGGTTTTCAACTGGCTATGG
GGCTGCAATCAACAATGCCAAGGTCACCCCTGGTTCGACTTGTGCTGTCTTTGGCCTAGGAGGTGTGGGT
CTTTCTGCTGTAATGGGTTGTAAAGCAGCAGGAGCTTCCAGAATCATAGGTATTGACATCAACAGTGAGA
AGTTTGTGAAGGCTAAAGCCCTGGGAGCCACTGACTGCCTCAATCCTAGAGACTTACATAAACCGATCCA
GGAAGTTATCATTGAATTGACCAAGGGAGGTGTGGATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACC
ATGAAAGCAGCCCTGGACTGTACAACCGCAGGCTGGGGATCATGTACTTTCATTGGAGTAGCTGCTGGTA
GCAAAGGATTGACTATTTTTCCAGAGGAGCTAATAATCGGCCGTACTATAAATGGAACATTCTTTGGTGG
TTGGAAAAGTGTAGATTCTATCCCAAAGCTGGTCACTGACTATAAGAATAAGAAATTCAATCTGGATGCA
CTGGTGACCCATACCCTGCCTTTTGACAAAATCAGTGAGGCATTTGACCTAATGAACCAAGGAAAAAGCG
TCCGAACAATCCTCATCTTTTGA

Translation (380 aa):
MGTKGKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLAFPVIVGHE
AAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLMEDKTSRFTCKG
KPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKVTPGSTCAVFGLGGVG
LSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSET
MKAALDCTTAGWGSCTFIGVAAGSKGLTIFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDA
LVTHTLPFDKISEAFDLMNQGKSVRTILIF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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