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Report for CCDS34164.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34164.1 Public Homo sapiens 5 ELOVL7 24 110 108 CCDS HistoryNCBI Gene:79993Re-query CCDS DB by CCDS ID:34164.1Re-query CCDS DB by GeneID:79993See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34164.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000425382.5 ENSP00000402634.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000425382.5Link to Ensembl Protein Viewer:ENSP00000402634.1Re-query CCDS DB by Nucleotide ID:ENST00000425382Re-query CCDS DB by Protein ID:ENSP00000402634
Original member Current member EBI ENST00000508821.6 ENSP00000424123.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000508821.6Link to Ensembl Protein Viewer:ENSP00000424123.1Re-query CCDS DB by Nucleotide ID:ENST00000508821Re-query CCDS DB by Protein ID:ENSP00000424123
Original member Current member NCBI NM_001104558.2 NP_001098028.1 Accepted alive Link to Nucleotide Sequence:NM_001104558.2Link to Protein Sequence:NP_001098028.1Re-query CCDS DB by Nucleotide ID:NM_001104558Re-query CCDS DB by Protein ID:NP_001098028Link to BLAST:NP_001098028.1
Original member Current member NCBI NM_024930.3 NP_079206.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024930.3Link to Protein Sequence:NP_079206.2Re-query CCDS DB by Nucleotide ID:NM_024930Re-query CCDS DB by Protein ID:NP_079206Link to BLAST:NP_079206.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001098028.1 281 A1L3X0 281 100% 0 0
NP_079206.2 281 A1L3X0 281 100% 0 0

Chromosomal Locations for CCDS 34164.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 60754624 60754833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 60757509 60757645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 60764227 60764332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 60766574 60766630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 60767823 60767903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 60771903 60772093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 60787334 60787397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (846 nt):
ATGGCCTTCAGTGATCTTACATCGAGGACTGTGCATCTTTATGATAATTGGATCAAAGATGCTGATCCAA
GAGTTGAAGATTGGCTCCTCATGTCCTCGCCTCTGCCACAAACCATCCTCCTAGGATTCTATGTCTATTT
TGTCACTTCCTTGGGACCAAAGCTCATGGAAAATCGCAAGCCCTTTGAACTCAAGAAAGCAATGATAACG
TACAATTTTTTCATAGTACTCTTTTCTGTGTATATGTGTTATGAGTTTGTGATGTCTGGCTGGGGTATAG
GTTATTCATTTCGATGTGACATTGTTGACTATTCACGGTCACCCACAGCTTTGAGGATGGCACGTACCTG
CTGGCTTTATTACTTCTCCAAATTTATTGAGCTATTAGATACGATCTTTTTTGTTCTGCGCAAGAAAAAT
AGCCAAGTGACTTTCCTTCATGTATTCCATCATACCATCATGCCGTGGACCTGGTGGTTTGGAGTCAAAT
TTGCTGCAGGTGGTTTGGGAACATTCCATGCCCTTCTAAATACAGCTGTACATGTAGTCATGTATTCCTA
CTATGGACTTTCTGCATTGGGGCCAGCCTACCAGAAGTATTTGTGGTGGAAAAAATATTTGACATCATTA
CAGCTTGTCCAGTTTGTTATTGTCGCCATCCACATAAGCCAGTTCTTTTTCATGGAGGATTGCAAGTATC
AGTTTCCAGTCTTTGCGTGCATCATTATGAGTTACAGTTTCATGTTTCTGCTGCTCTTTCTCCATTTTTG
GTACCGTGCTTACACCAAAGGTCAGAGGTTGCCCAAAACTGTGAAAAATGGAACTTGCAAAAACAAAGAT
AATTGA

Translation (281 aa):
MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRKPFELKKAMIT
YNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLYYFSKFIELLDTIFFVLRKKN
SQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAVHVVMYSYYGLSALGPAYQKYLWWKKYLTSL
QLVQFVIVAIHISQFFFMEDCKYQFPVFACIIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVKNGTCKNKD
N


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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