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Report for CCDS34346.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34346.1 Public Homo sapiens 6 MBOAT1 24 110 108 CCDS HistoryNCBI Gene:154141Re-query CCDS DB by CCDS ID:34346.1Re-query CCDS DB by GeneID:154141See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34346.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324607.8 ENSP00000324944.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324607.8Link to Ensembl Protein Viewer:ENSP00000324944.7Re-query CCDS DB by Nucleotide ID:ENST00000324607Re-query CCDS DB by Protein ID:ENSP00000324944
Original member Current member NCBI NM_001080480.3 NP_001073949.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080480.3Link to Protein Sequence:NP_001073949.1Re-query CCDS DB by Nucleotide ID:NM_001080480Re-query CCDS DB by Protein ID:NP_001073949Link to BLAST:NP_001073949.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073949.1 495 Q6ZNC8-1 495 100% 0 0

Chromosomal Locations for CCDS 34346.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 20102286 20102412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20109598 20109749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20112876 20113008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20115288 20115352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20118437 20118540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20124408 20124600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20126517 20126700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20128699 20128753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20131144 20131199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20144220 20144315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20151185 20151262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20152624 20152769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20212136 20212234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1488 nt):
ATGGCAGCAGAGCCGCAGCCGTCCAGCCTTTCCTACCGCACCACGGGCTCCACCTACCTGCACCCGCTCA
GC
GAGCTCCTGGGCATCCCGCTGGACCAGGTGAATTTTGTGGTATGCCAGCTTGTTGCTCTGTTTGCTGC
T
TTCTGGTTTCGCATCTACTTACGTCCTGGTACAACCAGCTCTGATGTCCGGCATGCGGTTGCCACCATT
TTT
GGCATCTATTTTGTCATCTTTTGTTTCGGCTGGTACTCTGTGCATCTTTTTGTGCTGGTGTTAATGT
GC
TATGCAATCATGGTCACTGCTAGTGTATCCAATATTCACAGATATTCCTTTTTTGTAGCAATGGGATA
T
CTTACAATATGCCACATCAGCCGAATATACATCTTCCACTATGGAATTCTCACTACGGATTTTTCTGGG
CCT
CTGATGATTGTCACTCAGAAGATCACAACCTTGGCATTCCAGGTTCATGATGGATTAGGTCGAAGAG
CT
GAAGACCTTTCTGCTGAACAACATCGACTTGCTATCAAAGTGAAACCCTCTTTTTTGGAATACTTAAG
T
TACCTTCTCAATTTCATGAGTGTCATAGCTGGTCCTTGTAACAATTTCAAGGACTACATAGCCTTCATT
GAG
GGGAAGCATATACACATGAAGTTGCTGGAGGTGAACTGGAAGCGAAAAGGTTTCCACAGCTTGCCAG
AA
CCTTCTCCCACAGGAGCTGTGATACACAAGTTGGGCATCACCTTGGTGTCTCTCCTTTTGTTTTTGAC
G
CTAACGAAGACCTTTCCTGTCACCTGCCTTGTGGATGACTGGTTTGTCCATAAAGCAAGCTTTCCGGCT
CGA
CTCTGCTACTTATATGTTGTCATGCAAGCCTCAAAGCCCAAGTATTACTTTGCATGGACATTAGCTG
AT
GCAGTGAATAACGCAGCTGGCTTTGGGTTCAGCGGAGTGGATAAGAATGGGAATTTCTGTTGGGATCT
G
CTTTCGAACCTAAACATCTGGAAAATTGAGACTGCCACAAGTTTCAAAATGTACTTGGAAAACTGGAAT
ATT
CAGACAGCTACTTGGCTAAAGTGTGTGTGCTATCAGCGGGTTCCATGGTACCCCACGGTGCTAACCT
TC
ATCCTGTCTGCTTTGTGGCATGGTGTCTACCCTGGATACTATTTTACCTTCTTAACTGGAATTCTTGT
C
ACATTAGCAGCTAGAGCGGTCAGGAACAACTACAGACATTACTTCCTTTCTTCAAGAGCTCTCAAGGCT
GTG
TATGATGCAGGCACCTGGGCCGTCACTCAGCTGGCTGTCTCTTACACGGTAGCACCCTTTGTGATGT
TG
GCAGTTGAACCGACCATCAGCTTATACAAGTCCATGTACTTTTATTTGCACATCATAAGTCTCCTGAT
A
ATACTATTTCTGCCAATGAAACCACAAGCTCATACGCAAAGGCGGCCTCAGACTCTGAACTCTATTAAT
AAG
AGAAAAACAGATTGA


Translation (495 aa):
MAAEPQPSSLSYRTTGSTYLHPLSELLGIPLDQVNFVVCQLVALFAAFWFRIYLRPGTTSSDVRHAVATI
F
GIYFVIFCFG
WYSVHLFVLVLMCYAIMVTASVSNIHRYSFFVAMGYLTICHISRIYIFHYGILTTDFSG
P
LMIVTQKITTLAFQVHD
GLGRRAEDLSAEQHRLAIKVKPSFLEYLSYLLNFMSVIAGPCNNFKDYIAFI
E
GKHIHMKLLEVNWKRKGFHSLPEPSPT
GAVIHKLGITLVSLLLFLTLTKTFPVTCLVDDWFVHKASFPA
R
LCYLYVVMQASKPKYYFAWTL
ADAVNNAAGFGFSGVDKNGNFCWDLLSNLNIWKIETATSFKMYLENWN
I
QTATWLK
CVCYQRVPWYPTVLTFILSALWHGVYPGYYFTFLTGILVTLAARAVRNNYRHYFLSSRALKA
V
YDAGTWAVTQLAVSYTVAPFVMLAVEPTISLY
KSMYFYLHIISLLIILFLPMKPQAHTQRRPQTLNSIN
K
RKTD




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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