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Report for CCDS3443.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3443.1 Public Homo sapiens 4 PGM2 24 110 108 CCDS HistoryNCBI Gene:55276Re-query CCDS DB by CCDS ID:3443.1Re-query CCDS DB by GeneID:55276See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3443.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381967.9 ENSP00000371393.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000381967.9Link to Ensembl Protein Viewer:ENSP00000371393.4Re-query CCDS DB by Nucleotide ID:ENST00000381967Re-query CCDS DB by Protein ID:ENSP00000371393
Original member Current member NCBI NM_018290.4 NP_060760.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018290.4Link to Protein Sequence:NP_060760.2Re-query CCDS DB by Nucleotide ID:NM_018290Re-query CCDS DB by Protein ID:NP_060760Link to BLAST:NP_060760.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060760.2 612 Q96G03-1 612 100% 0 0

Chromosomal Locations for CCDS 3443.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 37826733 37826813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 37829964 37830131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 37834618 37834724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 37837529 37837613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 37839848 37839931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 37840066 37840259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 37844364 37844553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 37845633 37845730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 37846931 37847111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 37847202 37847295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 37848522 37848651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 37850184 37850373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 37855608 37855741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 37861510 37861612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1839 nt):
ATGGCGGCTCCAGAAGGCAGCGGTCTAGGCGAGGACGCCCGGCTGGACCAGGAGACCGCCCAGTGGCTGC
GCTGGGACAAGAATTCCTTAACTTTGGAGGCAGTGAAACGACTAATAGCAGAAGGTAATAAAGAAGAACT
ACGAAAATGTTTTGGGGCCCGAATGGAGTTTGGGACAGCTGGCCTCCGAGCTGCTATGGGACCTGGAATT
TCTCGTATGAATGACTTGACCATCATCCAGACTACACAGGGATTTTGCAGATACCTGGAAAAACAATTCA
GTGACTTAAAGCAGAAAGGCATCGTGATCAGTTTTGACGCCCGAGCTCATCCATCCAGTGGGGGTAGCAG
CAGAAGGTTTGCCCGACTTGCTGCAACCACATTTATCAGTCAGGGGATTCCTGTGTACCTCTTTTCTGAT
ATAACGCCAACCCCCTTTGTGCCCTTCACAGTATCACATTTGAAACTTTGTGCTGGAATCATGATAACTG
CATCTCACAATCCAAAGCAGGATAATGGTTATAAGGTCTATTGGGATAATGGAGCTCAGATCATTTCTCC
TCACGATAAAGGGATTTCTCAAGCTATTGAAGAAAATCTAGAACCGTGGCCTCAAGCTTGGGACGATTCT
TTAATTGATAGCAGTCCACTTCTCCACAATCCGAGTGCTTCCATCAATAATGACTACTTTGAAGACCTTA
AAAAGTACTGTTTCCACAGGAGCGTGAACAGGGAGACAAAGGTGAAGTTTGTGCACACCTCTGTCCATGG
GGTGGGTCATAGCTTTGTGCAGTCAGCTTTCAAGGCTTTTGACCTTGTTCCTCCTGAGGCTGTTCCTGAA
CAGAAAGATCCGGATCCTGAGTTTCCAACAGTGAAATACCCGAATCCCGAAGAGGGGAAAGGTGTCTTGA
CTTTGTCTTTTGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAG
ACTTGCTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCTC
CTGGGCTGGTGGCTTTTTACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTACA
TGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAGGTTTTCATTTTGAGGA
AACATTAACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCAGGGGAAAACTGTTTTA
TTTGCATTTGAAGAAGCTATTGGATACATGTGCTGCCCTTTTGTTCTGGACAAAGATGGAGTCAGTGCCG
CTGTCATAAGTGCAGAGTTGGCTAGCTTCCTAGCAACCAAGAATTTGTCTTTGTCTCAGCAACTAAAGGC
CATTTATGTGGAGTATGGCTACCATATTACTAAAGCTTCCTATTTTATCTGCCATGATCAAGAAACCATT
AAGAAATTATTTGAAAACCTCAGAAACTACGATGGAAAAAATAATTATCCAAAAGCTTGTGGCAAATTTG
AAATTTCTGCCATTAGGGACCTTACAACTGGCTATGATGATAGCCAACCTGATAAAAAAGCTGTTCTTCC
CACTAGTAAAAGCAGCCAAATGATCACCTTCACCTTTGCTAATGGAGGCGTGGCCACCATGCGCACCAGT
GGGACAGAGCCCAAAATCAAGTACTATGCAGAGCTGTGTGCCCCACCTGGGAACAGTGATCCTGAGCAGC
TGAAGAAGGAACTGAATGAACTGGTCAGTGCTATTGAAGAACATTTTTTCCAGCCACAGAAGTACAATCT
GCAGCCAAAAGCAGACTAA

Translation (612 aa):
MAAPEGSGLGEDARLDQETAQWLRWDKNSLTLEAVKRLIAEGNKEELRKCFGARMEFGTAGLRAAMGPGI
SRMNDLTIIQTTQGFCRYLEKQFSDLKQKGIVISFDARAHPSSGGSSRRFARLAATTFISQGIPVYLFSD
ITPTPFVPFTVSHLKLCAGIMITASHNPKQDNGYKVYWDNGAQIISPHDKGISQAIEENLEPWPQAWDDS
LIDSSPLLHNPSASINNDYFEDLKKYCFHRSVNRETKVKFVHTSVHGVGHSFVQSAFKAFDLVPPEAVPE
QKDPDPEFPTVKYPNPEEGKGVLTLSFALADKTKARIVLANDPDADRLAVAEKQDSGEWRVFSGNELGAL
LGWWLFTSWKEKNQDRSALKDTYMLSSTVSSKILRAIALKEGFHFEETLTGFKWMGNRAKQLIDQGKTVL
FAFEEAIGYMCCPFVLDKDGVSAAVISAELASFLATKNLSLSQQLKAIYVEYGYHITKASYFICHDQETI
KKLFENLRNYDGKNNYPKACGKFEISAIRDLTTGYDDSQPDKKAVLPTSKSSQMITFTFANGGVATMRTS
GTEPKIKYYAELCAPPGNSDPEQLKKELNELVSAIEEHFFQPQKYNLQPKAD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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