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Report for CCDS35410.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35410.1 Public Homo sapiens X ATP11C 24 110 108 CCDS HistoryNCBI Gene:286410Re-query CCDS DB by CCDS ID:35410.1Re-query CCDS DB by GeneID:286410See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35410.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361648.6 ENSP00000355165.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361648.6Link to Ensembl Protein Viewer:ENSP00000355165.2Re-query CCDS DB by Nucleotide ID:ENST00000361648Re-query CCDS DB by Protein ID:ENSP00000355165
Original member Current member NCBI NM_001010986.3 NP_001010986.2 Accepted alive Link to Nucleotide Sequence:NM_001010986.3Link to Protein Sequence:NP_001010986.2Re-query CCDS DB by Nucleotide ID:NM_001010986Re-query CCDS DB by Protein ID:NP_001010986Link to BLAST:NP_001010986.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010986.2 1119 Q8NB49-3 1119 100% 0 0

Chromosomal Locations for CCDS 35410.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 139728900 139728962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139737916 139738069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139740991 139741094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139743559 139743624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139745722 139745857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139750025 139750152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139757808 139757867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139761961 139762106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139763316 139763418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139768260 139768434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139774690 139774953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139782547 139782728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139783164 139783267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139785226 139785299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139787173 139787244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139788192 139788343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139789327 139789488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139796273 139796470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139797176 139797326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139798273 139798354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139798679 139798743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139800060 139800110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139802236 139802339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139804471 139804599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139814878 139814985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139816863 139816943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139819338 139819427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139826704 139826823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139832154 139832189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3360 nt):
ATGCAGATGGTCCCATCTCTCCCTCCAGCCTCTGAGTGTGCTGGAGAAGAGAAACGAGTTGGCACACGCA
CA
GTGTTTGTTGGCAATCATCCAGTTTCGGAAACAGAAGCTTACATTGCACAAAGATTTTGTGATAATAG
A
ATAGTCTCATCTAAGTATACACTTTGGAATTTTCTCCCAAAGAATCTGTTTGAACAGTTTAGAAGAATT
GCA
AATTTTTATTTTCTCATAATCTTCCTTGTACAGGTCACAGTAGACACACCAACTAGCCCAGTTACCA
GT
GGACTTCCACTTTTCTTTGTTATAACTGTTACAGCCATCAAGCAGGGATATGAGGATTGTCTGAGACA
C
AGAGCTGACAATGAAGTCAACAAAAGCACTGTTTACATTATTGAAAATGCAAAGCGAGTGAGAAAAGAA
AGT
GAAAAAATCAAGGTTGGTGATGTAGTAGAAGTACAGGCAGATGAAACCTTTCCCTGTGATCTTATTC
TT
CTATCATCTTGCACCACTGATGGAACCTGTTATGTCACTACAGCCAGTCTTGATGGGGAATCCAATTG
C
AAGACACATTATGCAGTACGTGATACCATTGCACTGTGTACAGCAGAATCCATCGATACCCTCCGAGCA
GCA
ATTGAATGTGAACAGCCTCAACCTGACCTCTACAAATTTGTTGGGCGAATCAATATCTACAGTAATA
GT
CTTGAGGCTGTTGCCAGGTCTTTGGGACCTGAAAATCTCTTGCTGAAAGGAGCTACGCTAAAAAATAC
C
GAGAAGATATATGGAGTTGCTGTTTACACTGGAATGGAAACCAAAATGGCTTTGAACTACCAAGGGAAA
TCT
CAGAAACGTTCTGCTGTTGAAAAATCTATTAATGCTTTCCTGATTGTATATTTATTTATCTTACTGA
CC
AAAGCTGCAGTATGCACTACTCTAAAGTATGTTTGGCAAAGTACCCCATACAATGATGAACCTTGGTA
T
AACCAAAAGACTCAGAAAGAGCGAGAGACCTTGAAGGTTTTAAAAATGTTCACCGACTTCCTATCATTT
ATG
GTTCTATTCAACTTTATCATTCCTGTCTCCATGTACGTCACAGTAGAAATGCAGAAATTCTTGGGCT
CC
TTCTTCATCTCATGGGATAAGGACTTTTATGATGAAGAAATTAATGAAGGAGCCCTGGTTAACACATC
A
GACCTTAATGAAGAACTTGGTCAGGTGGATTATGTATTTACAGATAAGACTGGAACACTCACTGAAAAC
AGC
ATGGAATTCATTGAATGCTGCATAGATGGCCACAAATATAAAGGTGTAACTCAAGAGGTTGATGGAT
TA
TCTCAAACTGATGGAACTTTAACATATTTTGACAAAGTAGATAAGAATCGAGAAGAGCTGTTTCTACG
T
GCCTTGTGTTTATGTCATACTGTAGAAATCAAAACAAACGATGCTGTTGATGGAGCTACAGAATCAGCT
GAA
TTAACCTATATCTCCTCTTCACCAGATGAAATAGCTTTGGTGAAAGGAGCTAAAAGGTACGGGTTCA
CA
TTTTTAGGAAATCGAAATGGATATATGAGAGTAGAGAACCAAAGAAAAGAAATAGAAGAATATGAACT
T
CTTCACACCTTAAACTTTGATGCTGTCCGGCGACGTATGAGTGTAATTGTGAAGACTCAAGAAGGAGAC
ATA
CTTCTCTTTTGTAAAGGAGCAGACTCGGCAGTTTTTCCCAGAGTGCAAAATCATGAAATTGAGTTAA
CT
AAAGTCCATGTGGAACGTAATGCAATGGATGGGTATCGGACACTCTGTGTAGCCTTCAAAGAAATTGC
T
CCAGATGATTATGAAAGAATTAACAGACAGCTCATAGAGGCAAAAATGGCCTTACAAGACAGAGAAGAA
AAA
ATGGAAAAAGTTTTCGATGATATTGAGACAAACATGAATTTAATTGGAGCCACTGCAGTTGAAGACA
A
G
CTACAAGATCAAGCTGCAGAGACCATTGAAGCTCTGCATGCAGCAGGCCTGAAAGTCTGGGTGCTCAC
T
GGGGACAAGATGGAGACAGCTAAATCCACATGCTATGCCTGCCGCCTTTTCCAGACCAACACTGAGCTC
TTA
GAACTAACCACAAAAACCATTGAAGAAAGTGAAAGGAAAGAAGATCGATTACATGAATTATTGATAG
AA
TATCGCAAGAAATTGCTGCATGAGTTTCCTAAAAGTACTAGAAGCTTTAAAAAAGCATGGACAGAACA
T
CAGGAATATGGATTAATCATAGATGGCTCCACATTGTCACTCATACTAAATTCTAGTCAAGACTCTAGT
TCA
AACAATTACAAAAGCATTTTCCTACAAATATGTATGAAGTGTACTGCAGTGCTCTGCTGTCGGATGG
CA
CCATTACAGAAAGCCCAGATTGTCAGAATGGTGAAGAATTTAAAAGGCAGCCCAATAACTCTGTCGAT
A
GGTGATGGTGCCAATGATGTTAGTATGATCTTGGAATCCCATGTGGGAATAGGTATTAAAGGCAAAGAA
GGT
CGCCAAGCAGCTAGGAATAGCGATTATTCTGTTCCAAAGTTTAAACACTTAAAGAAACTGCTGTTGG
CT
CATGGACATCTATATTATGTGAGAATAGCACACCTTGTACAGTACTTCTTCTATAAGAACCTTTGTTT
C
ATTTTGCCACAGTTTTTGTACCAGTTCTTCTGTGGATTCTCACAACAGCCACTGTATGATGCTGCTTAC
CTT
ACAATGTACAATATCTGCTTCACATCCTTGCCCATCCTGGCCTATAGTCTACTGGAACAGCACATCA
AC
ATTGACACTCTGACCTCAGATCCCCGATTGTATATGAAAATTTCTGGCAATGCCATGCTACAGTTGGG
C
CCCTTCTTATATTGGACATTTCTGGCTGCCTTTGAAGGGACAGTGTTCTTCTTTGGGACTTACTTTCTT
TTT
CAGACTGCATCCCTAGAAGAAAATGGAAAGGTATACGGAAACTGGACTTTTGGAACCATTGTTTTTA
CA
GTCTTAGTATTCACTGTAACCCTGAAGCTTGCCTTGGATACCCGATTCTGGACGTGGATAAATCACTT
T
GTGATTTGGGGTTCTTTAGCCTTCTATGTATTTTTCTCATTCTTCTGGGGAGGAATTATTTGGCCTTTT
CTC
AAGCAACAGAGAATGTATTTTGTATTTGCCCAAATGCTGTCTTCTGTATCCACATGGTTGGCTATAA
TT
CTTCTAATATTTATCAGCCTGTTCCCTGAGATTCTTCTGATAGTATTAAAGAATGTAAGAAGAAGAAG
T
GCCAGGAATCCGAATCTTGAACTGCCTATGTTATTGTCCTACAAGCATACTGACAGTGGTTACAGCTAA


Translation (1119 aa):
MQMVPSLPPASECAGEEKRVGTRTVFVGNHPVSETEAYIAQRFCDNRIVSSKYTLWNFLPKNLFEQFRRI
A
NFYFLIIFLVQ
VTVDTPTSPVTSGLPLFFVITVTAIKQGYEDCLRHRADNEVNKSTVYIIENAKRVRKE
S
EKIK
VGDVVEVQADETFPCDLILLSSCTTDGTCYVTTASLDGESNCKTHYAVRDTIALCTAESIDTLRA
A
IECEQPQPDLY
KFVGRINIYSNSLEAVARSLGPENLLLKGATLKNTEKIYGVAVYTGMETKMALNYQGK
S
QKRSAVE
KSINAFLIVYLFILLTKAAVCTTLKYVWQSTPYNDEPWYNQKTQKERETLKVLKMFTDFLSF
M
VLFNFIIPVSMYVTVEMQKFLGSFFISWDKDFYDEEINEGALVNTSDLNEELGQ
VDYVFTDKTGTLTEN
S
MEFIECCIDGHKYKGVTQEVDGLSQTDGTLTYFDKVDK
NREELFLRALCLCHTVEIKTNDAVDGATESA
E
LTYISSSPDEIALVKGAK
RYGFTFLGNRNGYMRVENQRKEIEEYELLHTLNFDAVRRRMSVIVKTQEGD
I
LLFCKGADSAVFPRVQNHEIELTKVHVERNAM
DGYRTLCVAFKEIAPDDYERINRQLIEAKMALQDREE
K
MEKVFDDIETNMNLIGATAVED
KLQDQAAETIEALHAAGLKVWVLTGDKMETAKSTCYACRLFQTNTEL
L
ELTTKTIEESERKEDRLHELLIEYRKKLLHEFPKSTRSFK
KAWTEHQEYGLIIDGSTLSLILNSSQDSS
S
NNYKSIFLQICMKCTAVLCCRMAPLQKAQ
IVRMVKNLKGSPITLSIGDGANDVSMILESHVGIGIKGKE
G
RQAARNSDYSVPKFKHLKKLLLAHGHLYYVRIAHLVQYFFYK
NLCFILPQFLYQFFCGFSQQPLYDAAY
L
TMYNICFTSLPILAYSLLEQHINIDTLTSDPRLY
MKISGNAMLQLGPFLYWTFLAAFEGTVFFFGTYFL
F
QTASLEENGK
VYGNWTFGTIVFTVLVFTVTLKLALDTRFWTWINHFVIWGSLAFYVFFSFFWGGIIWPF
L
KQQRMYFVFAQMLSSVSTWLAIILLIFISLFPEILLIVLKNVRRRSAR
NPNLELPMLLSYKHTDSGYS



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser