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Report for CCDS35765.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35765.1 Public Mus musculus 1 Aldh9a1 23 108 98 CCDS HistoryNCBI Gene:56752Re-query CCDS DB by CCDS ID:35765.1Re-query CCDS DB by GeneID:56752See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35765.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028004.10 ENSMUSP00000028004.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028004.10Link to Ensembl Protein Viewer:ENSMUSP00000028004.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000028004Re-query CCDS DB by Protein ID:ENSMUSP00000028004
Original member Current member NCBI NM_019993.4 NP_064377.2 Accepted alive Link to Nucleotide Sequence:NM_019993.4Link to Protein Sequence:NP_064377.2Re-query CCDS DB by Nucleotide ID:NM_019993Re-query CCDS DB by Protein ID:NP_064377Link to BLAST:NP_064377.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064377.2 518 Q9JLJ2-2 518 100% 0 0

Chromosomal Locations for CCDS 35765.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 167350236 167350416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167352520 167352665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167354427 167354556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167355672 167355806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167356530 167356726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167357310 167357450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167361403 167361591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167361804 167361891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167364508 167364649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167365775 167365887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167367405 167367499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1557 nt):
ATGATCCTCGGTGCAGTCGGTTCTGTGCTGACCTCGCTCCTCCGCATTCACCGGGCTGCAGCAGTCGCCG
CCATGAGTACTGGCACCTTCGTCGTGTCGCAGCCGCTCAACTACCGCGGCGGGGCCCGTGTGGAGCCGGT
GGATGCTTCCGGCACGGAGAAAGCGTTCGAGCCAGCCACCGGCCGAGTGATTGCCACTTTCGCGTGTTCA
GGAGAAAAGGAAGTAAACTTGGCCGTTGAGAATGCAAAGGCTGCCTTTAAACTCTGGAGTAAGAAAAGTG
GCCTGGAGCGCTGCCAAGTCCTCCTAGAGGCTGCCCGGATCATCAAGGAGCGGAAGGATGAAATTGCCAC
CGTGGAGACCATCAACAACGGGAAGTCCATATTTGAGGCCCGCCTGGATGTTGACACTTGCTGGCAGTGC
CTGGAATACTATGCAGGGCTGGCTGCATCCATGGCAGGCGAGCACATTCAGCTCCCAGGAGGGTCCTTCG
GCTACACCCGAAGAGAGCCGCTTGGGGTGTGTGTGGGGATAGGAGCATGGAACTATCCCTTCCAGATCGC
CTGTTGGAAGTCTGCTCCGGCTCTGGCTTGTGGTAATGCCATGATCTTTAAGCCTTCTCCCTTCACGCCT
GTGTCTGCTCTGCTCCTGGCTGAGATCTACACCAAAGCGGGTGCGCCTCCGGGGCTCTTCAACGTGGTGC
AAGGTGGGGCTGCCACAGGCCAGTTTCTGTGTCATCATCGCGAGGTGGCCAAAATCTCCTTCACCGGAAG
TGTGCCCACTGGCGTGAAGATCATGGAGATGTCCGCTAAGGGAGTCAAGCCCATTACTTTGGAACTTGGG
GGCAAATCTCCTCTCATCATCTTCTCAGACTGTAATATGGAGAATGCTGTGAAGGGGGCCCTGATGGCCA
ACTTCCTCACACAAGGACAGGTCTGCTGCAATGGGACTAGAGTCTTTGTGCAAAAGGAAATTGCTGATAA
ATTCATAAATGAGGTTGTGAAGCAGACTCAGAAGATAAAACTTGGAGACCCCCTTCTGGAAGATACGAGG
ATGGGCCCACTCATCAACGCCCCACATCTGGAACGAGTCCTCGGGTTTGTCAAGTTGGCAAAGGAGCAGG
GTGCTACTGTGCTGTGTGGTGGAGAGGTGTATGTACCAGAGGACCCCAAATTAAAACATGGATATTACAT
GACACCTTGCATTTTAACTAATTGCAGAGACGACATGACTTGTGTAAAAGAAGAGATCTTTGGACCAGTC
ATGTCCATTTTAACATTTGGAACTGAAGCCGAGGTTCTAGAGCGAGCTAATGACACCACTTTTGGACTAG
CAGCTGGGGTCTTCACCAGGGACATCCAGAGGGCACACCGGGTGGCGGCTGAGCTGCAGGCTGGAACGTG
CTACATTAACAACTATAATGTCAGCCCAGTGGAGCTGCCCTTTGGTGGCTACAAGAAGTCAGGATTTGGC
AGAGAGAATGGCCGTGTGACGATTGAGTACTACTCTCAGCTGAAGACGGTGTGTGTGGAGATGGGCGACG
TGGAGTCAGCCTTTTGA

Translation (518 aa):
MILGAVGSVLTSLLRIHRAAAVAAMSTGTFVVSQPLNYRGGARVEPVDASGTEKAFEPATGRVIATFACS
GEKEVNLAVENAKAAFKLWSKKSGLERCQVLLEAARIIKERKDEIATVETINNGKSIFEARLDVDTCWQC
LEYYAGLAASMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTP
VSALLLAEIYTKAGAPPGLFNVVQGGAATGQFLCHHREVAKISFTGSVPTGVKIMEMSAKGVKPITLELG
GKSPLIIFSDCNMENAVKGALMANFLTQGQVCCNGTRVFVQKEIADKFINEVVKQTQKIKLGDPLLEDTR
MGPLINAPHLERVLGFVKLAKEQGATVLCGGEVYVPEDPKLKHGYYMTPCILTNCRDDMTCVKEEIFGPV
MSILTFGTEAEVLERANDTTFGLAAGVFTRDIQRAHRVAAELQAGTCYINNYNVSPVELPFGGYKKSGFG
RENGRVTIEYYSQLKTVCVEMGDVESAF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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