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Report for CCDS36288.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36288.1 Public Mus musculus 11 Phospho1 23 108 98 CCDS HistoryNCBI Gene:237928Re-query CCDS DB by CCDS ID:36288.1Re-query CCDS DB by GeneID:237928See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36288.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000054173.3 ENSMUSP00000057858.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000054173.3Link to Ensembl Protein Viewer:ENSMUSP00000057858.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000054173Re-query CCDS DB by Protein ID:ENSMUSP00000057858
Original member Current member NCBI NM_153104.3 NP_694744.1 Accepted alive Link to Nucleotide Sequence:NM_153104.3Link to Protein Sequence:NP_694744.1Re-query CCDS DB by Nucleotide ID:NM_153104Re-query CCDS DB by Protein ID:NP_694744Link to BLAST:NP_694744.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694744.1 267 Q8R2H9 267 100% 0 0

Chromosomal Locations for CCDS 36288.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 95828731 95828775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 95830551 95831309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (804 nt):
ATGAGCGGGTGTTTTCCAGCTGTTGGACTACGATGCCTATCTAGGGACGGCAGGATGGCTGCGCCGGGCG
CGCCTCGCTTCCTCCTCACCTTCGACTTCGATGAGACCATCGTGGACGAGAACAGCGACGACTCGATCGT
GCGTGCCGCGCCAGGCCAGCAACTGCCCGAGAGCCTGCGTGCCACCTATCGCGAGGGCTACTACAATGAG
TACATGCAACGAGTCTTTAAGTACCTGGGTGAGCAGGGTGTACGGCCCCGGGACCTGCGCGCTGTCTACG
AGACCATCCCCCTGTCGCCAGGCATGGGCGATTTGTTGCAGTTCATAGCCAAACAGGGCTCCTGCTTCGA
GGTTATTCTCATTTCGGATGCCAACACCTTCGGTGTGGAGAGTGCCCTGCGTGCCGCTGGCCACCACAGT
TTATTCCGCCGCATCCTCAGCAACCCGTCGGGGCCCGACGCGCGGGGACTGCTGACGCTGCGGCCCTTCC
ACACGCACAGCTGCTCGCGCTGCCCGGCCAACATGTGCAAGCACAAGGTGCTCAGCGAATACCTGCGTGA
GCGGGCCCGCGACGGCGTGCACTTCGAGCGCCTCTTCTACGTGGGTGATGGTGCAAATGACTTTTGCCCC
ATGGGGCTGCTGGCGGGCGGGGACGTGGCCTTCCCGCGCCGCGGCTACCCCATGCACCGCCTCATCCAGG
AGGCACAGAAAGCTGAGCCCAGCTCCTTCCGCGCCCACGTGGTGCCCTGGGAAACAGCCGCCGATGTGCG
CCAACATCTGCAACAGGTGCTGAAGATGTGTTGA

Translation (267 aa):
MSGCFPAVGLRCLSRDGRMAAPGAPRFLLTFDFDETIVDENSDDSIVRAAPGQQLPESLRATYREGYYNE
YMQRVFKYLGEQGVRPRDLRAVYETIPLSPGMGDLLQFIAKQGSCFEVILISDANTFGVESALRAAGHHS
LFRRILSNPSGPDARGLLTLRPFHTHSCSRCPANMCKHKVLSEYLRERARDGVHFERLFYVGDGANDFCP
MGLLAGGDVAFPRRGYPMHRLIQEAQKAEPSSFRAHVVPWETAADVRQHLQQVLKMC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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