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Report for CCDS3644.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3644.1 Public Homo sapiens 4 PDHA2 24 110 108 CCDS HistoryNCBI Gene:5161Re-query CCDS DB by CCDS ID:3644.1Re-query CCDS DB by GeneID:5161See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3644.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295266.6 ENSP00000295266.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295266.6Link to Ensembl Protein Viewer:ENSP00000295266.4Re-query CCDS DB by Nucleotide ID:ENST00000295266Re-query CCDS DB by Protein ID:ENSP00000295266
Original member Current member NCBI NM_005390.5 NP_005381.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005390.5Link to Protein Sequence:NP_005381.1Re-query CCDS DB by Nucleotide ID:NM_005390Re-query CCDS DB by Protein ID:NP_005381Link to BLAST:NP_005381.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005381.1 388 P29803 388 100% 0 0

Chromosomal Locations for CCDS 3644.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 95840151 95841317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1167 nt):
ATGCTGGCCGCCTTCATCTCCCGCGTGTTGAGGCGAGTTGCCCAGAAATCAGCTCGCAGAGTGCTGGTGG
CATCCCGTAACTCCTCAAATGACGCTACATTTGAAATTAAGAAATGTGATCTTTATCTGTTGGAAGAGGG
TCCCCCTGTCACTACAGTGCTCACTAGGGCGGAGGGGCTTAAATACTACAGGATGATGCTGACTGTTCGC
CGCATGGAATTGAAGGCAGATCAGCTGTACAAACAGAAATTCATTCGCGGTTTCTGTCACCTGTGCGATG
GTCAGGAAGCTTGTTGCGTGGGCCTTGAGGCCGGCATAAACCCCTCGGATCACGTCATTACATCCTATAG
GGCTCATGGTGTGTGCTATACTCGGGGACTTTCTGTCCGATCCATTCTCGCAGAGCTGACGGGAAGAAGA
GGAGGTTGTGCTAAAGGAAAAGGAGGATCGATGCATATGTATACCAAGAACTTCTATGGGGGCAATGGCA
TCGTCGGTGCACAGGGCCCCCTGGGCGCTGGCATTGCTCTGGCCTGTAAATATAAAGGAAACGATGAGAT
CTGTTTGACTTTATATGGGGATGGCGCTGCGAATCAGGGGCAGATAGCCGAAGCTTTCAATATGGCAGCT
TTATGGAAATTACCTTGTGTTTTCATCTGTGAGAATAACCTATATGGAATGGGAACATCTACTGAGAGAG
CAGCAGCCAGCCCTGATTACTACAAGAGGGGCAATTTTATCCCTGGGCTAAAGGTCGATGGAATGGATGT
TCTGTGTGTTCGTGAGGCAACAAAATTTGCAGCTAACTACTGTAGATCTGGAAAGGGGCCCATACTGATG
GAGCTGCAAACCTACCGTTATCATGGACACAGTATGAGTGATCCTGGAGTCAGTTATCGTACACGAGAAG
AAATTCAGGAAGTAAGAAGTAAGAGGGATCCTATAATAATTCTCCAAGATAGAATGGTAAACAGCAAGCT
CGCCACTGTGGAAGAATTAAAGGAAATTGGGGCTGAGGTGAGGAAAGAAATTGATGATGCTGCCCAGTTT
GCTACCACTGATCCTGAGCCACATTTGGAAGAATTAGGCCATCACATCTACAGCAGTGATTCATCTTTTG
AAGTTCGTGGTGCAAATCCATGGATCAAGTTTAAGTCCGTCAGTTAA

Translation (388 aa):
MLAAFISRVLRRVAQKSARRVLVASRNSSNDATFEIKKCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVR
RMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVRSILAELTGRR
GGCAKGKGGSMHMYTKNFYGGNGIVGAQGPLGAGIALACKYKGNDEICLTLYGDGAANQGQIAEAFNMAA
LWKLPCVFICENNLYGMGTSTERAAASPDYYKRGNFIPGLKVDGMDVLCVREATKFAANYCRSGKGPILM
ELQTYRYHGHSMSDPGVSYRTREEIQEVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQF
ATTDPEPHLEELGHHIYSSDSSFEVRGANPWIKFKSVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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