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Report for CCDS36800.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36800.1 Public Mus musculus 14 Pdhb 23 108 98 CCDS HistoryNCBI Gene:68263Re-query CCDS DB by CCDS ID:36800.1Re-query CCDS DB by GeneID:68263See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36800.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022268.9 ENSMUSP00000022268.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022268.9Link to Ensembl Protein Viewer:ENSMUSP00000022268.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000022268Re-query CCDS DB by Protein ID:ENSMUSP00000022268
Original member Current member NCBI NM_024221.3 NP_077183.1 Accepted alive Link to Nucleotide Sequence:NM_024221.3Link to Protein Sequence:NP_077183.1Re-query CCDS DB by Nucleotide ID:NM_024221Re-query CCDS DB by Protein ID:NP_077183Link to BLAST:NP_077183.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077183.1 359 Q9D051 359 100% 0 0

Chromosomal Locations for CCDS 36800.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 8166336 8166481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8166713 8166854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8169345 8169436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8169709 8169819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8170161 8170446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8171140 8171175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8171267 8171329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8171423 8171530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8172764 8172817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8172891 8172932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1080 nt):
ATGGCGGTGGTGGCTGGTCTGGTGCGGGGACCCTTGCGGCAGGCTTCCGGGCTGCTGAAGAGGCGTTTTC
ACCGCTCGGCGCCCGCAGCGGTGCAGTTGACAGTTCGTGAAGCTATTAATCAAGGTATGGATGAAGAACT
AGAAAGAGATGAAAAAGTTTTTCTGCTTGGGGAAGAAGTTGCCCAGTATGACGGTGCATACAAGGTTAGC
AGAGGCCTGTGGAAGAAATACGGTGACAAGAGGATCATCGACACCCCCATCTCAGAGATGGGCTTTGCTG
GAATTGCTGTTGGTGCAGCTATGGCTGGGTTGCGGCCCATCTGTGAATTTATGACCTTCAATTTCTCTAT
GCAAGCTATTGACCAGGTTATAAACTCAGCTGCCAAGACTTACTATATGTCCGCTGGCCTTCAGCCTGTG
CCCATAGTATTCAGGGGGCCCAATGGCGCCTCAGCAGGTGTAGCTGCTCAGCACTCGCAATGCTTTGCTG
CATGGTATGGGCACTGCCCAGGTTTAAAAGTGGTCAGCCCCTGGAATTCCGAGGATGCAAAAGGACTTAT
TAAATCGGCCATTCGTGATAATAACCCAGTGGTAATGCTAGAAAATGAACTGATGTATGGAGTTGCATTT
GAACTTCCTGCAGAAGCTCAGTCAAAAGATTTCCTGATTCCTATTGGAAAAGCCAAAATTGAAAGGCAAG
GGACCCACATCACTGTAGTTGCCCATTCAAGACCAGTGGGCCACTGCCTAGAAGCTGCAGCTGTATTGTC
TAAGGAGGGAATTGAATGTGAGGTAATAAATCTGCGCACCATCAGACCAATGGACATCGAAGCCATAGAA
GCCAGTGTGATGAAGACAAATCATCTCGTGACTGTGGAAGGAGGCTGGCCACAATTTGGAGTAGGAGCTG
AGATTTGTGCCAGAATTATGGAAGGCCCTGCATTCAACTTCCTTGATGCCCCTGCCGTGCGTGTCACTGG
TGCTGATGTCCCTATGCCTTACGCAAAGGTCCTAGAAGACAACTCCGTACCTCAGGTCAAAGACATCATA
TTTGCAGTAAAGAAGACTCTGAACATCTGA

Translation (359 aa):
MAVVAGLVRGPLRQASGLLKRRFHRSAPAAVQLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVS
RGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPV
PIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVMLENELMYGVAF
ELPAEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEVINLRTIRPMDIEAIE
ASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKVLEDNSVPQVKDII
FAVKKTLNI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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