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Report for CCDS3712.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3712.1 Public Homo sapiens 4 FABP2 24 110 108 CCDS HistoryNCBI Gene:2169Re-query CCDS DB by CCDS ID:3712.1Re-query CCDS DB by GeneID:2169See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3712.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000274024.4 ENSP00000274024.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000274024.4Link to Ensembl Protein Viewer:ENSP00000274024.3Re-query CCDS DB by Nucleotide ID:ENST00000274024Re-query CCDS DB by Protein ID:ENSP00000274024
Original member Current member NCBI NM_000134.4 NP_000125.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000134.4Link to Protein Sequence:NP_000125.2Re-query CCDS DB by Nucleotide ID:NM_000134Re-query CCDS DB by Protein ID:NP_000125Link to BLAST:NP_000125.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000125.2 132 P12104 132 100% 0 0

Chromosomal Locations for CCDS 3712.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 119319041 119319091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 119319536 119319643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 119320670 119320842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 119322036 119322102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (399 nt):
ATGGCGTTTGACAGCACTTGGAAGGTAGACCGGAGTGAAAACTATGACAAGTTCATGGAAAAAATGGGTG
TTAATATAGTGAAAAGGAAGCTTGCAGCTCATGACAATTTGAAGCTGACAATTACACAAGAAGGAAATAA
ATTCACAGTCAAAGAATCAAGCACTTTTCGAAACATTGAAGTTGTTTTTGAACTTGGTGTCACCTTTAAT
TACAATCTAGCAGACGGAACTGAACTCAGGGGGACCTGGAGCCTTGAGGGAAATAAACTTATTGGAAAAT
TCAAACGGACAGACAATGGAAACGAACTGAATACTGTCCGAGAAATTATAGGTGATGAACTAGTCCAGAC
TTATGTATATGAAGGAGTAGAAGCCAAAAGGATCTTTAAAAAGGATTGA

Translation (132 aa):
MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSTFRNIEVVFELGVTFN
YNLADGTELRGTWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTYVYEGVEAKRIFKKD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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