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Report for CCDS37159.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37159.1 Public Mus musculus 15 Cyp2d22 23 108 98 CCDS HistoryNCBI Gene:56448Re-query CCDS DB by CCDS ID:37159.1Re-query CCDS DB by GeneID:56448See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37159.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023083.8 ENSMUSP00000023083.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023083.8Link to Ensembl Protein Viewer:ENSMUSP00000023083.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000023083Re-query CCDS DB by Protein ID:ENSMUSP00000023083
Original member Current member NCBI NM_001163472.1 NP_001156944.1 Accepted alive Link to Nucleotide Sequence:NM_001163472.1Link to Protein Sequence:NP_001156944.1Re-query CCDS DB by Nucleotide ID:NM_001163472Re-query CCDS DB by Protein ID:NP_001156944Link to BLAST:NP_001156944.1
Original member Current member NCBI NM_019823.4 NP_062797.3 Accepted alive Link to Nucleotide Sequence:NM_019823.4Link to Protein Sequence:NP_062797.3Re-query CCDS DB by Nucleotide ID:NM_019823Re-query CCDS DB by Protein ID:NP_062797Link to BLAST:NP_062797.3

Chromosomal Locations for CCDS 37159.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82371547 82371725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82371822 82371963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82372390 82372577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82372785 82372926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82373111 82373287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82373673 82373833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82373904 82374056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82374298 82374469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82375793 82375981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1503 nt):
ATGAGACTGCCGACCGGGGCTGAACTGTGGCCCATAGCCATATTCACGGTCATCTTCCTGATTCTGGTGA
ACCTGATGCACTGGCGCCAGCGCTGGACTGCCCACTACCCTCCAGGCCCTATGCCGTGGCCTGTGCTTGG
GAACCTGCTGCACATGGACTTCCAGAATATGCCAGCAGGCTTCCAAAAGCTGCGGGGTCGCTATGGGGAC
CTGTTCAGCCTACAGCTGGCCTCTGAGTCAGTGGTTGTACTAAATGGGCTGACGGCCCTGCGAGAGGCAC
TGGTGAAACACAGCGAGGACACTGCTGACCGGCCACCGCTGCATTTCAATGACCTGCTGGGCTTTGGACC
ACGCTCTCAAGGTATAGTCCTAGCACGGTATGGGCCTGCCTGGCGTCAGCAGCGGCGCTTCTCTGTGTCT
ACCATGCACCACTTTGGCCTGGGCAAGAAGTCACTGGAGCAGTGGGTGACTGAGGAGGCCAGATGCCTCT
GTGCCGCCTTCGCTGACCATACTGGACACCCTTTCAGCCCTAACACCCTATTGGACAAAGCAGTGTGTAA
CGTGATCGCGTCCCTCCTCTATGCCTGCCGCTTTGAGTACGATGACCCACGCTTCATCAGGCTACTGGGC
TTGTTGAAGGAAACTCTTAAGGAGGAAGCTGGATTCCTACCCATGTTCCTGAATGTGTTCCCGATGCTCC
TGCGCATCCCGGGGCTGGTTGGCAAGGTCTTCCCTGGGAAAAGGGCCTTTGTTACCATGTTGGATGAGCT
GCTGGCTGAACACAAGACGACCTGGGACCCTACCCAGCCACCCCGAGATTTGACTGATGCCTTCCTGGCT
GAGGTGGAGAAGGCCAAGGGGAATCCTGAGAGCAGCTTCAATGATGAGAACCTGCGCACGGTAGTGGGTG
ACCTGTTCTCTGCAGGGATGGTGACCACCTCAACCACACTGTCCTGGGCCCTGATGCTCATGATCCTGCA
TCCAGATGTGCAGCGCCGAGTACAACAGGAAATCGATGAAGTCATAGGGCAGGTGCAGTGTCCAGAGATG
GCAGACCAGGCTCGCATGCCCTACACCAATGCTGTCATTCATGAGGTGCAGCGCTTTGCAGACATTCTCC
CTCTTGGTGTACCTCACAAGACTTCTCGTGACATTGAACTACAGGGCTTCCTTATCCCTAAGGGGACGAC
CCTCATCACCAACCTGTCCTCCGCGCTAAAAGATGAGACTGTCTGGGAGAAGCCCCTCTGCTTCCATCCT
GAACACTTCCTGGATGCCCAGGGCCACTTTGTGAAGCCTGAGGCCTTCATGCCATTCTCAGCAGGCCGCA
GATCATGCCTGGGGGAGCCCCTGGCCCGCATGGAGCTCTTCCTCTTCTTCACCTGCCTCCTGCAGCGCTT
TAGCATCTCAGTGCCCGATGGACAGCCCCAGCCCAGCGACCATGGCGTCTTTAGGGCTCTGACAACCCCA
TGCCCCTACCAGCTCTGTGCTTTGCCCCGCTAA

Translation (500 aa):
MRLPTGAELWPIAIFTVIFLILVNLMHWRQRWTAHYPPGPMPWPVLGNLLHMDFQNMPAGFQKLRGRYGD
LFSLQLASESVVVLNGLTALREALVKHSEDTADRPPLHFNDLLGFGPRSQGIVLARYGPAWRQQRRFSVS
TMHHFGLGKKSLEQWVTEEARCLCAAFADHTGHPFSPNTLLDKAVCNVIASLLYACRFEYDDPRFIRLLG
LLKETLKEEAGFLPMFLNVFPMLLRIPGLVGKVFPGKRAFVTMLDELLAEHKTTWDPTQPPRDLTDAFLA
EVEKAKGNPESSFNDENLRTVVGDLFSAGMVTTSTTLSWALMLMILHPDVQRRVQQEIDEVIGQVQCPEM
ADQARMPYTNAVIHEVQRFADILPLGVPHKTSRDIELQGFLIPKGTTLITNLSSALKDETVWEKPLCFHP
EHFLDAQGHFVKPEAFMPFSAGRRSCLGEPLARMELFLFFTCLLQRFSISVPDGQPQPSDHGVFRALTTP
CPYQLCALPR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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