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Report for CCDS37549.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37549.1 Public Mus musculus 17 Ndufv3 23 108 98 CCDS HistoryNCBI Gene:78330Re-query CCDS DB by CCDS ID:37549.1Re-query CCDS DB by GeneID:78330See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37549.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000046288.15 ENSMUSP00000049000.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000046288.15Link to Ensembl Protein Viewer:ENSMUSP00000049000.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000046288Re-query CCDS DB by Protein ID:ENSMUSP00000049000
Original member Current member NCBI NM_030087.2 NP_084363.2 Accepted alive Link to Nucleotide Sequence:NM_030087.2Link to Protein Sequence:NP_084363.2Re-query CCDS DB by Nucleotide ID:NM_030087Re-query CCDS DB by Protein ID:NP_084363Link to BLAST:NP_084363.2

Chromosomal Locations for CCDS 37549.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 31520214 31520261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31521569 31521692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31527310 31528401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31531110 31531252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1407 nt):
ATGGCGGTCTCTCTCCTCCTGCGGGGAGGACGGATCCGGGCGCTGAAGGCTGTGCTCCTGGAGGCAAGGG
TGTTCCCGGGAGAACTGGTTTCTGTAGTGAGGCTGTCTACAGAGTCAGAGAAGAGTGCAAAGGAGAAAGA
GCTACATCCCAAGACACAAAGTGTGCTCAAAGATGTGGGAGCAGAGGAGAGGGGCAAGCTCCTAACCGCG
CACACAGCAGCGGCACTGTCCAAAAACTCACCTCCACCCAGTTCTTACCCATCAGTGGAGAACACAGGTG
GGGCTGTGGCAGGCCCGCACCCTGGCGGCAGCCTGCTGCCCACAGATGAAGGGCTTCCGAAGCATTTGTC
AAGAAAGACTTTGGTAGCGTTTCCTCAGAAAGTTATGCCTCCACCCCAAGCACGGGGTTCTGACTCAAAG
GCTCAGGGGCACGTGCAGAAAGTGACAAACGATTCATCTTCATCTTCCTCATCCAGCTCCTCAGATTCAG
ATTCTGATGGGGAGGAACATGACTCAGACCGTGCTCCCCGAGTGGCAAGCAAAGGCAAGGCAGGGTCTTC
CAAACCGGAGGCCTCCCGGCCCTTGACGACTGGAGCCCCTAAAATCACAGTTTCTGCAAAAGAGAAGGCC
AAGGTCCAAAAGCCACCCACAGATGTCACCTACCCAGAGAAGACCCTGCAGCCTAAGAAGAAATGGACCA
AGCCTGTAGAAGACAGCAAAGAAGCCAGGTCCAAGCCCGTGACATCCAGGCCACAGTCCAGTGAGATGTT
GGAGCAAAACGTGAAGGAAGAACACCAACGGGGGAAACCGAGACCAGACAAGACAGGAAAGGAAAGCGCA
AAGCCATGTGAAGCTGAAGGAATCTTACCCAGCCACGGGAAAGTCAGAGTACCCACACAGCCCACTAGTG
GGCCAGTGCCCACAACGCAAATACAAGAGGCCAGTGCAGAACATCCGCCAGCCGTTGCCCCCAGGAAGGG
AGCTAGATATCCGGAACCAAAAGTGCCAGAGCCCGGATGGAAGACCTCTTCTCCCCTGCTCAGAAAAGAA
AGCGCAGAGAAGCAGGTGCCAGAAGGAGGCTCCCAGGTCCAGGAGGTCTTGGAAGATCAGAAACCAGTGA
GCTATTCGAAGACACTTCCTGTTCAGGAGAAAGATACTGTTGAAGAGAGTGCCAGACCACATCTGGAGGG
GAGGTTCCAGGTGGCAGTCGAAGCCCCACCCACTGATGCAGTCCTACCCCAGGAAGCCCCGGCCGACACA
CAGGAGCCCGAGCCGACTGACACCACCACCTACAAGAACCTGCAGCACCATGACTACAACACATACACCT
TCCTGGACCTGAACCTGGACCTCTCCAAATTCAGGCTGCCACAGCCGTCTTCAGGACGAGAGTCACCTCG
GCACTGA

Translation (468 aa):
MAVSLLLRGGRIRALKAVLLEARVFPGELVSVVRLSTESEKSAKEKELHPKTQSVLKDVGAEERGKLLTA
HTAAALSKNSPPPSSYPSVENTGGAVAGPHPGGSLLPTDEGLPKHLSRKTLVAFPQKVMPPPQARGSDSK
AQGHVQKVTNDSSSSSSSSSSDSDSDGEEHDSDRAPRVASKGKAGSSKPEASRPLTTGAPKITVSAKEKA
KVQKPPTDVTYPEKTLQPKKKWTKPVEDSKEARSKPVTSRPQSSEMLEQNVKEEHQRGKPRPDKTGKESA
KPCEAEGILPSHGKVRVPTQPTSGPVPTTQIQEASAEHPPAVAPRKGARYPEPKVPEPGWKTSSPLLRKE
SAEKQVPEGGSQVQEVLEDQKPVSYSKTLPVQEKDTVEESARPHLEGRFQVAVEAPPTDAVLPQEAPADT
QEPEPTDTTTYKNLQHHDYNTYTFLDLNLDLSKFRLPQPSSGRESPRH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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