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Report for CCDS37971.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
37971.1 |
Public |
Mus musculus |
19 |
Pde6c |
23 |
108 |
98 |
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Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 37971.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000025956.12 |
ENSMUSP00000025956.5 |
Accepted |
alive |
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NCBI |
NM_033614.2 |
NP_291092.1 |
Updated |
not alive |
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NCBI |
NM_033614.3 |
NP_291092.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_291092.1 |
861 |
Q91ZQ1-1 |
861 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 37971.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2586 nt): ATGGGTGAGATCAGCCAAGAGGCCGTGGAGCGCTACCTGGAGAAGAACCCTTGTTTTGCCAAAGAGTATT TTGACAAGAAACTACGGGTGGAGGCACTGGGGGTGATCTTCAAAAACAGCCATGCAGGGGTCCAGACCGG CTTGTCGCTCCCTGAGATGACACAGGTGGAGGAGTCGGCCGTGTGCCTGGAGCTACTGCAGTGTATGCAG GACGAGGCCGGAAGCGCGGAGCAGATGGCTCACCGGGCACTGCAGAGGCTCGCTCAACTTCTGCAGGCTG ATTGCTGCAGTATGTTCTCGTGCAGAGCAAGAAACGGCATACCAGAGGTGGCCTCCAGGCTGCTGAACGT CACCCCAACTTCTAAGTTTGAGGACAACCTCGTGGCCCCTGACAGAGAAGTTGTATTTCCGTTGGACATT GGGATAGTTGGCTGGGTCGCTCATGTGAAGAAAGCCCTTAATGTCTCAGATGTCAAAAAGAACAGCCATT TTTCTGACTTTATGGACAAGCAAACTGGATATGTCACCAGGAATCTGCTAGCAGTCCCGATCGTGGCAGG CAAGGAGGTCCTTGCTGTGGTCATGGCAGTGAACAAAATCAGCGCTCCCGAGTTTTCCAAACAGGATGAG GAGGTCTTTTCTAAGTACCTCAGCTTTGTTGCTGTCGCACTAAGGCTGCAGCACACCAGTTACCTGTACA GTGTGGAGTCCCGGAGAAGCCAGATCCTTATGTGGTCAGCCAATAAAGTATTCGAAGAGCTCACTGATGT TGAGCGACAGTTTCACAAGGCACTGTACACCATCAGGACGTACCTGAACTGCGATCGCTACTCCATTGGT CTTCTGGACATGACCAAGGAGAAGGAATTTTACGATGAGTGGCCAATCAAGCTTGGAGAAGTTGAGCCTT ATAAAGGACCAAAGACTCCAGATGGCAGGGAAATCATCTTCTATAAAATCATCGATTACATTTTACATGG AAAAGAAGAGATCAACGTGATTCCGTCACCTCCAGCAGACCACTGGACGCTTGTTAGTGGATTGCCAACA TACGTTGCAGAAAATGGATTTATCTGTAACATGCTGAATGCCCCTGCAGATGAGTACTTCACATTTCAGA AAGGACCGGTAGATGAGACTGGCTGGGTCATTAAAAATGTCTTGTCCCTGCCTATTGTCAACAAGAAAGA AGACATCGTGGGTGTAGCTACGTTTTACAACCGGAAGGATGGGAAACCCTTTGATGAGCATGATGAACAT ATCACTGAGACTTTAACCCAGTTTCTTGGATGGTCTCTTTTAAACACCGATACCTATGAGCGAGTGAACA AGCTGGAAAGCAGAAAGGACATTGCTCAGGAAATGGTTATGAACCTCACAAAAGCCACCCCGGATGAAAT CAGCTCTATTCTGAAGTTTAAAGAGAAGTTAAATGTAGAGGTAATTGAAGAGTGTGAAGAGAGACAGCTC CTGGCCATATTGAAGGAGGACTTGCCGGACCCGAGAACAGCAGACCTGTACGAGTTCTGTTTCAGCGACT TCCCCATTACGGAGCACGAGTTGGTTAAATGCGGGCTGAGGCTGTTTTTGGAGATAAACGTGGTGGAGAA ATTCAAAGTCCCTGTAGAGGTTCTTACAAGGTGGATGTACACAGTCCGGAAAGGGTACCGTCCTGTCACC TACCACAACTGGCGGCACGGATTCAACGTGGGGCAGACCATGTTCACTTTGTTAATGACAGGAAGACTAA AGAAATACTATACAGACCTTGAAGCCTTTGCCATGCTCGCTGCTGCTTTCTGCCATGACATTGACCACAG AGGCACCAATAACTTGTACCAAATGAAGTCCACATCTCCACTTGCAAGGCTTCATGGGACTTCCATTTTA GAGCGACATCACCTGGAATATAGCAAGACTCTCTTGCAGGATGAGAGTTTAAACATCTTCCAGAATCTAA ACAAGCGGCAGTTTGAAACGGTGATCCATTTGTTCGAGGTTGCAATAATAGCAACTGACCTGGCACTCTA TTTCAAGAAGAGAACCATGTTTCAAAAGATCGTTGATACCTGCGAGCAGATGCAAAGTGAAGAAGAAACC ATCAAATACGTAACCTCCGACCCGACCAAAAAGGAAGTCATCATGGCCATGATGATGACTGCCTGTGACC TGTCTGCCATCACCAAGCCCTGGGAGGTGCAGAGTCAGGTAGCACTTCTGGTTGCAAATGAATTTTGGGA ACAAGGAGATCTGGAAAGAACAGTGCTGCAGCAGCAACCAATTCCTATGATGGACAGAAGCAAAAAGGAT GAACTCCCGAAACTTCAAGTGGGATTTATTGATTTTGTTTGTACTTTCGTATATAAGGAGTTCTCTCGGT TTCATGGAGAGATCACACCCATGCTGAACGGCCTTCAGAATAACAGGGTGGAATGGAAATCCCTGGCGGA GGAGTACGAGGCGAAGGTGAAGGTGACTGAAGAAGAGGCGGGAAAGCAGGAAGAAGAAGCCTCAGATGGA AAAGCTGCCACAGATTTAGGAGGCAGCGCCGAAGACAAAAAGTCCAAAACATGCTTAATGTTATAA
Translation (861 aa): MGEISQEAVERYLEKNPCFAKEYFDKKLRVEALGVIFKNSHAGVQTGLSLPEMTQVEESAVCLELLQCMQ DEAGSAEQMAHRALQRLAQLLQADCCSMFSCRARNGIPEVASRLLNVTPTSKFEDNLVAPDREVVFPLDI GIVGWVAHVKKALNVSDVKKNSHFSDFMDKQTGYVTRNLLAVPIVAGKEVLAVVMAVNKISAPEFSKQDE EVFSKYLSFVAVALRLQHTSYLYSVESRRSQILMWSANKVFEELTDVERQFHKALYTIRTYLNCDRYSIG LLDMTKEKEFYDEWPIKLGEVEPYKGPKTPDGREIIFYKIIDYILHGKEEINVIPSPPADHWTLVSGLPT YVAENGFICNMLNAPADEYFTFQKGPVDETGWVIKNVLSLPIVNKKEDIVGVATFYNRKDGKPFDEHDEH ITETLTQFLGWSLLNTDTYERVNKLESRKDIAQEMVMNLTKATPDEISSILKFKEKLNVEVIEECEERQL LAILKEDLPDPRTADLYEFCFSDFPITEHELVKCGLRLFLEINVVEKFKVPVEVLTRWMYTVRKGYRPVT YHNWRHGFNVGQTMFTLLMTGRLKKYYTDLEAFAMLAAAFCHDIDHRGTNNLYQMKSTSPLARLHGTSIL ERHHLEYSKTLLQDESLNIFQNLNKRQFETVIHLFEVAIIATDLALYFKKRTMFQKIVDTCEQMQSEEET IKYVTSDPTKKEVIMAMMMTACDLSAITKPWEVQSQVALLVANEFWEQGDLERTVLQQQPIPMMDRSKKD ELPKLQVGFIDFVCTFVYKEFSRFHGEITPMLNGLQNNRVEWKSLAEEYEAKVKVTEEEAGKQEEEASDG KAATDLGGSAEDKKSKTCLML
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