CCDS Report for Consensus CDS

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Report for CCDS40457.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
40457.1	Public	Mus musculus	8		23	108	98

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40457.1

Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status
EBI	ENSMUST00000073149.6	ENSMUSP00000072893.5	Accepted	alive
NCBI	NM_001081332.1	NP_001074801.1	Updated	not alive
NCBI	NM_001081332.2	NP_001074801.1	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001074801.1	898	B2RXE2	898	100%	0	0

Chromosomal Locations for CCDS 40457.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)

Genome Browser links:

Chromosome	Start	Stop
8	105349377	105349572
8	105353423	105353725
8	105355144	105355307
8	105355471	105355549
8	105355847	105356024
8	105356531	105356751
8	105356971	105357173
8	105357394	105357483
8	105357581	105357651
8	105358374	105358503
8	105359092	105359180
8	105359327	105359453
8	105363263	105363433
8	105363937	105364006
8	105364682	105364816
8	105368006	105368475

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2697 nt):
ATGCTGAGCGCCGCACTGCTTCTTCTGCCCGGGTTGCCCCTGGCGGGGGCGGGGGCCACAGAAGAACCCA CCCAGGAGTCCGGGCCGTTGGGTGAGCCTCCTCCAGGCTTGGCGCTCTTCCGCTGGCAGTGGCACGAGGT GGAGGCGCCCTACCTGGTGGCCCTGTGGATCCTGGTGGCCAGCTTAGCCAAAATCGTGTTCCACCTGTCC CGGAAGGTAACATCTCTGGTCCCTGAGAGCTGCCTGCTGATTTTGCTGGGCCTGGTGCTAGGGGGCATTG TCTTAGCCGTGGCCAAGAAGGCTGAGTACCAGCTGGAGCCGGGGACCTTCTTCCTTTTCCTGCTCCCTCC CATCGTGCTAGACTCAGGCTATTTCATGCCCAGCCGGCTGTTTTTTGACAACTTGGGTGCCATCCTCACC TACGCCGTGGTGGGCACACTCTGGAATGCCTTCACAACAGGTGTTGCCCTTTGGGGCCTGCAGCAGGCTG GACTTGTGGCTCCTAGGGTACAGGCTGGCCTGCTGGATTTCTTGCTGTTTGGGAGTCTCATCTCAGCAGT GGACCCTGTGGCCGTGTTGGCCGTCTTTGAGGAGGTGCATGTCAATCAGACCCTCTTTATCATCATCTTC GGCGAGTCTCTGCTCAATGATGCAGTAACTGTGGTGCTGTACAAGGTCTGCAACTCCTTTGTGGAGATGG GCTCTGCCAACGTGCAGGCCACTGACTACCTAAAGGGCGTCGCCTCCCTGTTTGTGGTCAGTCTGGGCGG GGCAGCGGTGGGCTTAGTCTTTGCCTTCCTCCTGGCCCTGACCACACGCTTCACCAAGCGGGTCCGCATC ATCGAGCCGTTGCTGGTCTTCCTCCTCGCCTACGCAGCCTACCTCACTGCTGAGATGGCCTCGTTGTCCG CCATTCTTGCGGTGACCATGTGTGGCCTGGGATGTAAGAAATACGTGGAAGCCAACATCTCCCATAAGTC CCGCACGGCTGTCAAGTACACGATGAAAACACTCGCCAGCTGTGCCGAAACGGTCATCTTCATGTTACTT GGCATCTCGGCCGTGGACTCTTCCAAATGGGCCTGGGACTCTGGGCTGGTGCTGGGCACCCTCTTCTTCA TCCTGTTCTTCCGAGCCCTCGGCGTGGTCTTGCAGACGTGGGCGCTGAATCAGTTCCGGCTGGTCCCTCT GGACAAGATTGACCAGGTGGTGATGTCCTATGGGGGCCTTCGGGGGGCTGTGGCCTTTGCTCTCGTCATC CTCCTGGACAGGACCAAAGTCCCTGCCAAGGACTACTTTGTGGCCACCACTATTGTGGTGGTCTTCTTCA CCGTCATCGTGCAGGGTTTGACCATCAAGCCACTGGTCAAGTGGCTGAGGGTGAAGAGGAGTGATTACCA CAAACCCACCTTGAACCAGGAGCTGCATGAGCACACTTTTGACCACATTCTGGCCGCAGTGGAGGACGTT GTGGGGCACCATGGCTACCACTACTGGAGGGACAGGTGGGAACAGTTTGACAAGAAGTACCTGAGTCAGC TCTTGATGCGGCGGTCAGCCTATCGTATCCGCGACCAGATCTGGGATGTGTACTACAGACTCAACATCCG AGATGCCATCAGCTTTGTGGACCAGGGAGGCCATGTCTTGTCCTCCACAGGACTCACTCTGCCCTCTATG CCTAGCAGAAATTCTGTGGCAGAGACCTCTGTCACCAACCTGTTGAGGGAGAGCGGCAGTGGAGCGTGTC TGGATCTGCAGGTGATTGACACGGTGCGCAGCGGCCGAGACCGGGAGGATGCCGTGATGCATCATCTGCT CTGTGGAGGCCTCTACAAGCCACGGCGCAGGTACAAAGCTAGCTGCGGCCGCCACTTCATCTCAGAGGAT GCCCAGGAGCGACAGGACAAGGAGATCTTCCAGCAGAACATGAAGCGACGGCTTGAGTCCTTTAAGTCCA CCAAACATAACATCTGTTTCACCAAGAGCAAACCTCGGCCCCGAAAGACCAGCCATAAGAAGAAGGATGG TGTGGCTAATCCCGAAGCTACCAATGGGAAGCCTCCTCGAGACCTGGGCTTTCAGGACACAGCTGCAGTG ATACTAACCGTGGAGTCTGAGGAGGAGGAAGAAAGCGACAGTTCAGAGACAGAGAAAGAGGACGATGAAG GGATCATCTTTGTGGCTCGTGCCACCAGTGAGGTTCTCCAGGAAGGCAAGGTCTCAGGAAGCCTTGAGGT GTGTCCAAGCCCACGCATCATTCCCCCATCCCCAACCTGTGCAGAGAAGGAGTTACCCTGGAAGAGTGGG CAGGGAGACCTGGCTGTGTATGTGTCTTCAGAAACAACCAAGATCGTGCCTGTGGACATGCAGACAGGCT GGAACCAGAGCATCTCGTCCCTGGAGAGCCTGGCATCCCCTCCCTGCACCCAGCCCCCGACTTTAACCCG CTTACCCCCCCACCCTCTGGTCACTGAAGAGCCCCAGGTTCCTATTGACCTGTCTTCTGACCCTCGCTCT AGCTTTGCCTTCCCCCCAAGCCTGGCCAAAGCTGGTCGTTCTCGAAGTGAGAGCAGCGCTGACATCCCCC AGCAGGAGTTGCAGCCCCTCATGGGCCACAAGGACCACACTCACCTTAGTCCGGGCACTGCCAACTCCCA CTGGTGCATCCAGTTCAACCGAGGAGGCAGGCTGTAG
Translation (898 aa):
MLSAALLLLPGLPLAGAGATEEPTQESGPLGEPPPGLALFRWQWHEVEAPYLVALWILVASLAKIVFHLS RKVTSLVPESCLLILLGLVLGGIVLAVAKKAEYQLEPGTFFLFLLPPIVLDSGYFMPSRLFFDNLGAILT YAVVGTLWNAFTTGVALWGLQQAGLVAPRVQAGLLDFLLFGSLISAVDPVAVLAVFEEVHVNQTLFIIIF GESLLNDAVTVVLYKVCNSFVEMGSANVQATDYLKGVASLFVVSLGGAAVGLVFAFLLALTTRFTKRVRI IEPLLVFLLAYAAYLTAEMASLSAILAVTMCGLGCKKYVEANISHKSRTAVKYTMKTLASCAETVIFMLL GISAVDSSKWAWDSGLVLGTLFFILFFRALGVVLQTWALNQFRLVPLDKIDQVVMSYGGLRGAVAFALVI LLDRTKVPAKDYFVATTIVVVFFTVIVQGLTIKPLVKWLRVKRSDYHKPTLNQELHEHTFDHILAAVEDV VGHHGYHYWRDRWEQFDKKYLSQLLMRRSAYRIRDQIWDVYYRLNIRDAISFVDQGGHVLSSTGLTLPSM PSRNSVAETSVTNLLRESGSGACLDLQVIDTVRSGRDREDAVMHHLLCGGLYKPRRRYKASCGRHFISED AQERQDKEIFQQNMKRRLESFKSTKHNICFTKSKPRPRKTSHKKKDGVANPEATNGKPPRDLGFQDTAAV ILTVESEEEEESDSSETEKEDDEGIIFVARATSEVLQEGKVSGSLEVCPSPRIIPPSPTCAEKELPWKSG QGDLAVYVSSETTKIVPVDMQTGWNQSISSLESLASPPCTQPPTLTRLPPHPLVTEEPQVPIDLSSDPRS SFAFPPSLAKAGRSRSESSADIPQQELQPLMGHKDHTHLSPGTANSHWCIQFNRGGRL

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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