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Report for CCDS40928.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40928.1 Public Mus musculus X Ndufa1 23 108 98 CCDS HistoryNCBI Gene:54405Re-query CCDS DB by CCDS ID:40928.1Re-query CCDS DB by GeneID:54405See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40928.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000016571.7 ENSMUSP00000016571.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000016571.7Link to Ensembl Protein Viewer:ENSMUSP00000016571.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000016571Re-query CCDS DB by Protein ID:ENSMUSP00000016571
Original member Current member NCBI NM_019443.2 NP_062316.1 Accepted alive Link to Nucleotide Sequence:NM_019443.2Link to Protein Sequence:NP_062316.1Re-query CCDS DB by Nucleotide ID:NM_019443Re-query CCDS DB by Protein ID:NP_062316Link to BLAST:NP_062316.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062316.1 70 O35683 70 100% 0 0

Chromosomal Locations for CCDS 40928.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 37187721 37187741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 37189874 37189963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 37190989 37191090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (213 nt):
ATGTGGTTCGAGATTCTCCCTGGCCTCGCCATTATGGGGGTGTGCTTGGTCATCCCCGGGGTGTCCACTG
CGTACATCCACAAATTCACCAACGGGGGCAAGGAAAAACGAGTTGCTCGTGTTCAGTACCAGTGGTATCT
GATGGAACGCGATAGACGTATCTCTGGAGTCAATCGCTACTATGTGTCCAAGGGCCTGGAAAACATTGAC
TAA

Translation (70 aa):
MWFEILPGLAIMGVCLVIPGVSTAYIHKFTNGGKEKRVARVQYQWYLMERDRRISGVNRYYVSKGLENID


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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