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Report for CCDS4128.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4128.1 Public Homo sapiens 5 FTMT 24 110 108 CCDS HistoryNCBI Gene:94033Re-query CCDS DB by CCDS ID:4128.1Re-query CCDS DB by GeneID:94033See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4128.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321339.3 ENSP00000313691.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000321339.3Link to Ensembl Protein Viewer:ENSP00000313691.1Re-query CCDS DB by Nucleotide ID:ENST00000321339Re-query CCDS DB by Protein ID:ENSP00000313691
Original member Current member NCBI NM_177478.2 NP_803431.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_177478.2Link to Protein Sequence:NP_803431.1Re-query CCDS DB by Nucleotide ID:NM_177478Re-query CCDS DB by Protein ID:NP_803431Link to BLAST:NP_803431.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_803431.1 242 Q8N4E7 242 100% 0 0

Chromosomal Locations for CCDS 4128.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 121851964 121852692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (729 nt):
ATGCTGTCCTGCTTCAGGCTCCTCTCCAGGCACATCAGCCCTTCGCTGGCGTCTCTGCGCCCGGTGCGCT
GCTGCTTCGCGCTCCCGCTGCGTTGGGCCCCGGGGCGCCCCTTGGACCCCAGGCAGATCGCCCCCCGCCG
CCCCCTGGCCGCAGCCGCCTCCTCCCGGGACCCTACCGGGCCCGCCGCCGGCCCCTCTCGGGTGCGCCAG
AACTTCCACCCCGACTCCGAGGCTGCCATCAACCGCCAGATCAACCTCGAGCTCTATGCGTCCTACGTGT
ACTTGTCCATGGCCTATTACTTCTCCCGGGATGACGTGGCCTTGAACAACTTCTCCAGGTATTTCCTTCA
CCAGTCCCGGGAGGAGACCGAGCACGCGGAGAAGCTGATGAGGCTGCAGAACCAGCGAGGAGGCCGGATC
CGCCTGCAGGACATCAAGAAGCCGGAACAGGACGACTGGGAAAGCGGGCTGCATGCCATGGAGTGTGCTC
TACTCTTGGAAAAGAACGTGAACCAGTCGTTGCTGGAATTGCACGCTCTAGCCTCAGATAAAGGTGACCC
CCATTTGTGCGATTTCCTGGAAACCTACTACCTGAATGAGCAGGTGAAGTCTATCAAAGAACTAGGTGAC
CACGTGCACAACTTAGTGAAGATGGGGGCCCCGGATGCTGGCCTGGCGGAGTACCTTTTTGACACACATA
CCCTTGGAAATGAAAACAAGCAGAACTAA

Translation (242 aa):
MLSCFRLLSRHISPSLASLRPVRCCFALPLRWAPGRPLDPRQIAPRRPLAAAASSRDPTGPAAGPSRVRQ
NFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSREETEHAEKLMRLQNQRGGRI
RLQDIKKPEQDDWESGLHAMECALLLEKNVNQSLLELHALASDKGDPHLCDFLETYYLNEQVKSIKELGD
HVHNLVKMGAPDAGLAEYLFDTHTLGNENKQN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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