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Report for CCDS42206.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42206.1 Public Homo sapiens 16 MLYCD 24 110 108 CCDS HistoryNCBI Gene:23417Re-query CCDS DB by CCDS ID:42206.1Re-query CCDS DB by GeneID:23417See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42206.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262430.6 ENSP00000262430.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262430.6Link to Ensembl Protein Viewer:ENSP00000262430.4Re-query CCDS DB by Nucleotide ID:ENST00000262430Re-query CCDS DB by Protein ID:ENSP00000262430
Original member Current member NCBI NM_012213.3 NP_036345.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012213.3Link to Protein Sequence:NP_036345.2Re-query CCDS DB by Nucleotide ID:NM_012213Re-query CCDS DB by Protein ID:NP_036345Link to BLAST:NP_036345.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036345.2 493 O95822-1 493 100% 0 0

Chromosomal Locations for CCDS 42206.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 83899145 83899672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 83906987 83907099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 83908126 83908282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 83912218 83912367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 83914956 83915489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1482 nt):
ATGCGAGGCTTCGGGCCAGGCTTGACGGCCAGGCGTCTCCTCCCGCTGCGGTTGCCCCCGCGGCCGCCCG
GGCCCCGGCTGGCGAGCGGGCAGGCGGCCGGCGCCCTGGAGCGGGCCATGGACGAGCTGCTGCGCCGCGC
GGTGCCGCCGACGCCGGCCTACGAGCTGCGCGAGAAGACACCGGCGCCCGCCGAGGGTCAGTGCGCGGAC
TTCGTGAGCTTCTACGGTGGGCTGGCCGAGACGGCCCAGCGGGCCGAACTGCTGGGCCGCCTGGCGCGGG
GCTTCGGCGTGGACCACGGCCAGGTGGCGGAGCAGAGCGCCGGCGTGCTCCATCTGCGCCAGCAGCAGCG
GGAGGCGGCGGTGCTGCTGCAGGCCGAGGACCGGCTGCGCTACGCGCTGGTGCCGCGCTATCGCGGCCTC
TTCCACCACATCAGCAAGCTGGACGGCGGCGTGCGCTTCCTGGTGCAGCTGCGGGCCGACCTGCTGGAGG
CGCAGGCCCTCAAGCTGGTGGAGGGGCCGGACGTCCGGGAAATGAATGGGGTGCTGAAAGGAATGCTCTC
AGAATGGTTTTCCTCCGGGTTCCTGAACCTAGAACGGGTTACCTGGCATTCACCGTGTGAAGTGCTTCAG
AAAATCAGTGAGGCTGAGGCTGTGCATCCTGTAAAAAACTGGATGGACATGAAGCGCCGCGTTGGGCCCT
ACAGAAGGTGTTACTTCTTTTCTCACTGTTCGACCCCTGGGGAGCCCCTGGTCGTTTTGCACGTGGCACT
GACTGGTGACATCTCCAGCAACATCCAGGCAATCGTGAAGGAACATCCTCCATCAGAAACAGAAGAGAAG
AACAAAATCACTGCTGCGATCTTTTATTCCATCAGCTTGACCCAGCAGGGACTCCAAGGGGTGGAGCTGG
GAACATTCCTCATAAAGCGAGTCGTCAAGGAGTTGCAGAGAGAGTTTCCTCACCTTGGGGTGTTTTCAAG
TCTGTCACCTATACCTGGTTTCACCAAATGGCTTCTGGGGCTTCTGAACTCGCAAACGAAGGAGCATGGG
AGGAATGAACTCTTTACAGATTCGGAATGTAAGGAAATCTCGGAGATCACAGGTGGCCCCATTAACGAGA
CCCTCAAGCTCCTCCTCAGCAGCAGCGAGTGGGTGCAGTCGGAGAAGCTGGTGCGGGCGCTGCAGACTCC
GCTGATGAGGCTGTGCGCCTGGTACCTGTATGGAGAGAAGCACCGCGGCTACGCGCTGAACCCCGTGGCC
AACTTCCACCTGCAGAACGGGGCGGTGCTGTGGCGCATCAACTGGATGGCGGATGTGAGCCTCAGAGGCA
TCACCGGCTCCTGCGGCCTGATGGCCAACTACCGCTACTTCCTGGAGGAGACGGGCCCCAACAGCACCTC
CTACCTCGGCTCCAAGATCATCAAAGCCTCTGAGCAGGTCCTCAGCCTAGTGGCCCAGTTTCAAAAGAAC
AGCAAGCTCTGA

Translation (493 aa):
MRGFGPGLTARRLLPLRLPPRPPGPRLASGQAAGALERAMDELLRRAVPPTPAYELREKTPAPAEGQCAD
FVSFYGGLAETAQRAELLGRLARGFGVDHGQVAEQSAGVLHLRQQQREAAVLLQAEDRLRYALVPRYRGL
FHHISKLDGGVRFLVQLRADLLEAQALKLVEGPDVREMNGVLKGMLSEWFSSGFLNLERVTWHSPCEVLQ
KISEAEAVHPVKNWMDMKRRVGPYRRCYFFSHCSTPGEPLVVLHVALTGDISSNIQAIVKEHPPSETEEK
NKITAAIFYSISLTQQGLQGVELGTFLIKRVVKELQREFPHLGVFSSLSPIPGFTKWLLGLLNSQTKEHG
RNELFTDSECKEISEITGGPINETLKLLLSSSEWVQSEKLVRALQTPLMRLCAWYLYGEKHRGYALNPVA
NFHLQNGAVLWRINWMADVSLRGITGSCGLMANYRYFLEETGPNSTSYLGSKIIKASEQVLSLVAQFQKN
SKL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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