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Report for CCDS43679.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43679.1 Public Homo sapiens 7 AOC1 24 110 108 CCDS HistoryNCBI Gene:26Re-query CCDS DB by CCDS ID:43679.1Re-query CCDS DB by GeneID:26See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43679.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360937.9 ENSP00000354193.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360937.9Link to Ensembl Protein Viewer:ENSP00000354193.4Re-query CCDS DB by Nucleotide ID:ENST00000360937Re-query CCDS DB by Protein ID:ENSP00000354193
Original member Current member EBI ENST00000467291.5 ENSP00000418328.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000467291.5Link to Ensembl Protein Viewer:ENSP00000418328.1Re-query CCDS DB by Nucleotide ID:ENST00000467291Re-query CCDS DB by Protein ID:ENSP00000418328
Original member Current member EBI ENST00000493429.5 ENSP00000418614.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000493429.5Link to Ensembl Protein Viewer:ENSP00000418614.1Re-query CCDS DB by Nucleotide ID:ENST00000493429Re-query CCDS DB by Protein ID:ENSP00000418614
Original member Current member NCBI NM_001091.4 NP_001082.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001091.4Link to Protein Sequence:NP_001082.2Re-query CCDS DB by Nucleotide ID:NM_001091Re-query CCDS DB by Protein ID:NP_001082Link to BLAST:NP_001082.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001082.2 751 P19801-1 751 100% 0 0

Chromosomal Locations for CCDS 43679.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 150856471 150858040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150858763 150859048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150860501 150860633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150860943 150861209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2256 nt):
ATGCCGGCCCTGGGCTGGGCCGTGGCTGCCATCCTGATGCTGCAGACGGCCATGGCGGAGCCCTCCCCGG
GGACTCTGCCCAGGAAGGCAGGGGTGTTTTCAGACCTAAGCAACCAAGAGCTGAAGGCAGTGCACAGCTT
CCTCTGGTCCAAGAAGGAGCTGAGGCTGCAGCCCTCCAGTACCACCACCATGGCCAAGAACACCGTGTTT
CTCATCGAGATGCTGCTGCCCAAGAAGTACCATGTGCTGAGGTTTCTGGATAAAGGTGAAAGGCATCCTG
TGCGGGAAGCCCGTGCCGTCATCTTCTTTGGTGACCAGGAGCATCCCAATGTCACCGAGTTTGCTGTGGG
GCCCCTGCCAGGGCCCTGCTACATGCGAGCACTGTCCCCCAGGCCTGGGTACCAGTCCTCCTGGGCATCG
AGGCCCATCTCCACAGCAGAGTATGCCCTCCTCTACCACACCCTGCAGGAAGCCACCAAGCCCCTGCATC
AGTTCTTCCTCAATACCACAGGCTTCTCATTCCAAGACTGCCATGACAGATGCCTGGCCTTCACCGATGT
GGCCCCCCGGGGTGTGGCTTCTGGCCAGCGCCGCAGTTGGCTTATCATACAGCGCTATGTAGAAGGCTAC
TTTCTGCACCCCACTGGGCTGGAGCTCCTCGTGGATCATGGGAGCACAGATGCTGGGCACTGGGCCGTGG
AGCAGGTGTGGTACAACGGGAAGTTCTATGGGAGCCCAGAGGAACTGGCTCGGAAGTATGCAGATGGAGA
GGTGGACGTGGTGGTCCTGGAGGACCCGCTGCCTGGGGGCAAGGGGCATGACAGCACAGAGGAGCCGCCC
CTCTTCTCCTCCCACAAGCCCCGCGGGGACTTCCCCAGCCCCATCCATGTGAGCGGCCCCCGCTTGGTCC
AGCCCCACGGCCCTCGCTTCAGGCTGGAGGGCAACGCTGTGCTCTACGGCGGCTGGAGCTTTGCCTTCCG
GCTGCGCTCCTCCTCCGGGCTGCAGGTCCTGAACGTGCACTTCGGCGGAGAGCGCATTGCCTATGAGGTC
AGCGTGCAAGAGGCAGTGGCGCTGTATGGAGGACACACACCTGCAGGCATGCAGACCAAGTACCTCGATG
TCGGCTGGGGCCTGGGCAGCGTCACTCATGAGTTAGCCCCCGGCATCGACTGCCCGGAGACCGCCACCTT
CCTGGACACTTTCCACTACTATGATGCCGATGACCCGGTCCATTATCCCCGAGCCCTCTGCCTCTTTGAA
ATGCCCACAGGGGTGCCCCTTCGGCGGCACTTTAATTCCAACTTTAAAGGTGGCTTCAACTTCTATGCGG
GGCTGAAGGGCCAGGTGCTGGTGCTGCGGACAACTTCAACTGTCTACAATTATGATTACATTTGGGACTT
TATCTTCTACCCCAACGGGGTGATGGAGGCCAAGATGCATGCCACTGGCTACGTCCACGCCACCTTCTAC
ACCCCCGAGGGGCTGCGCCACGGCACTCGCCTGCACACCCACCTGATTGGCAACATACACACTCACTTGG
TGCACTACCGCGTAGACCTGGATGTGGCAGGCACCAAGAACAGCTTCCAGACACTGCAGATGAAGCTAGA
AAACATCACCAACCCCTGGAGCCCAAGACACCGCGTGGTCCAGCCAACTCTGGAGCAGACGCAGTACTCC
TGGGAGCGCCAGGCGGCCTTCCGCTTCAAAAGGAAGCTGCCTAAGTACCTGCTCTTTACCAGCCCCCAGG
AGAACCCCTGGGGCCACAAGCGCACGTACCGCCTGCAGATCCACTCCATGGCCGACCAGGTGCTGCCCCC
AGGCTGGCAGGAGGAGCAGGCCATCACCTGGGCAAGGTACCCCCTGGCAGTGACCAAGTACCGGGAGTCG
GAGCTGTGCAGCAGCAGCATCTACCACCAGAACGACCCCTGGCACCCGCCCGTGGTCTTTGAGCAGTTTC
TTCACAACAACGAGAACATTGAAAATGAGGACCTGGTGGCCTGGGTGACGGTGGGCTTCCTGCACATCCC
CCACTCAGAGGACATTCCCAACACAGCCACACCTGGGAACTCCGTGGGCTTCCTGCTCCGGCCATTCAAC
TTCTTCCCAGAGGACCCCTCCCTGGCATCCAGAGACACTGTGATCGTGTGGCCTCGGGACAACGGCCCCA
ACTACGTCCAGCGCTGGATCCCTGAGGACAGGGACTGCTCGATGCCTCCCCCTTTTAGCTACAATGGGAC
CTATAGACCTGTGTGA

Translation (751 aa):
MPALGWAVAAILMLQTAMAEPSPGTLPRKAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVF
LIEMLLPKKYHVLRFLDKGERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMRALSPRPGYQSSWAS
RPISTAEYALLYHTLQEATKPLHQFFLNTTGFSFQDCHDRCLAFTDVAPRGVASGQRRSWLIIQRYVEGY
FLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGEVDVVVLEDPLPGGKGHDSTEEPP
LFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEGNAVLYGGWSFAFRLRSSSGLQVLNVHFGGERIAYEV
SVQEAVALYGGHTPAGMQTKYLDVGWGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFE
MPTGVPLRRHFNSNFKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFY
TPEGLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYS
WERQAAFRFKRKLPKYLLFTSPQENPWGHKRTYRLQIHSMADQVLPPGWQEEQAITWARYPLAVTKYRES
ELCSSSIYHQNDPWHPPVVFEQFLHNNENIENEDLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFN
FFPEDPSLASRDTVIVWPRDNGPNYVQRWIPEDRDCSMPPPFSYNGTYRPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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