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Report for CCDS44274.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44274.1 Public Homo sapiens 1 NME7 24 110 108 CCDS HistoryNCBI Gene:29922Re-query CCDS DB by CCDS ID:44274.1Re-query CCDS DB by GeneID:29922See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44274.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000472647.5 ENSP00000433341.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000472647.5Link to Ensembl Protein Viewer:ENSP00000433341.1Re-query CCDS DB by Nucleotide ID:ENST00000472647Re-query CCDS DB by Protein ID:ENSP00000433341
Original member Current member NCBI NM_197972.3 NP_932076.1 Accepted alive Link to Nucleotide Sequence:NM_197972.3Link to Protein Sequence:NP_932076.1Re-query CCDS DB by Nucleotide ID:NM_197972Re-query CCDS DB by Protein ID:NP_932076Link to BLAST:NP_932076.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932076.1 340 Q9Y5B8-2 340 100% 0 0

Chromosomal Locations for CCDS 44274.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 169132785 169132817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169169447 169169554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169230718 169230819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169235131 169235199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169237623 169237687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169287303 169287408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169298556 169298763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169303145 169303195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169309970 169310080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169323117 169323283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169324393 169324395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1023 nt):
ATGCATGATGTAAAGAATCATCGCACCTTTTTAAAGCGGACCAAATATGATAACCTGCACTTGGAAGATT
TATTTATAGGCAACAAAGTGAATGTCTTTTCTCGACAACTGGTATTAATTGACTATGGGGATCAATATAC
AGCTCGCCAGCTGGGCAGTAGGAAAGAAAAAACGCTAGCCCTAATTAAACCAGATGCAATATCAAAGGCT
GGAGAAATAATTGAAATAATAAACAAAGCTGGATTTACTATAACCAAACTCAAAATGATGATGCTTTCAA
GGAAAGAAGCATTGGATTTTCATGTAGATCACCAGTCAAGACCCTTTTTCAATGAGCTGATCCAGTTTAT
TACAACTGGTCCTATTATTGCCATGGAGATTTTAAGAGATGATGCTATATGTGAATGGAAAAGACTGCTG
GGACCTGCAAACTCTGGAGTGGCACGCACAGATGCTTCTGAAAGCATTAGAGCCCTCTTTGGAACAGATG
GCATAAGAAATGCAGCGCATGGCCCTGATTCTTTTGCTTCTGCGGCCAGAGAAATGGAGTTGTTTTTTCC
TTCAAGTGGAGGTTGTGGGCCGGCAAACACTGCTAAATTTACTAATTGTACCTGTTGCATTGTTAAACCC
CATGCTGTCAGTGAAGGACTGTTGGGAAAGATCCTGATGGCTATCCGAGATGCAGGTTTTGAAATCTCAG
CTATGCAGATGTTCAATATGGATCGGGTTAATGTTGAGGAATTCTATGAAGTTTATAAAGGAGTAGTGAC
CGAATATCATGACATGGTGACAGAAATGTATTCTGGCCCTTGTGTAGCAATGGAGATTCAACAGAATAAT
GCTACAAAGACATTTCGAGAATTTTGTGGACCTGCTGATCCTGAAATTGCCCGGCATTTACGCCCTGGAA
CTCTCAGAGCAATCTTTGGTAAAACTAAGATCCAGAATGCTGTTCACTGTACTGATCTGCCAGAGGATGG
CCTATTAGAGGTTCAATACTTCTTCAAGATCTTGGATAATTAG

Translation (340 aa):
MHDVKNHRTFLKRTKYDNLHLEDLFIGNKVNVFSRQLVLIDYGDQYTARQLGSRKEKTLALIKPDAISKA
GEIIEIINKAGFTITKLKMMMLSRKEALDFHVDHQSRPFFNELIQFITTGPIIAMEILRDDAICEWKRLL
GPANSGVARTDASESIRALFGTDGIRNAAHGPDSFASAAREMELFFPSSGGCGPANTAKFTNCTCCIVKP
HAVSEGLLGKILMAIRDAGFEISAMQMFNMDRVNVEEFYEVYKGVVTEYHDMVTEMYSGPCVAMEIQQNN
ATKTFREFCGPADPEIARHLRPGTLRAIFGKTKIQNAVHCTDLPEDGLLEVQYFFKILDN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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