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Report for CCDS4434.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4434.1 Public Homo sapiens 5 PHYKPL 24 110 108 CCDS HistoryNCBI Gene:85007Re-query CCDS DB by CCDS ID:4434.1Re-query CCDS DB by GeneID:85007See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4434.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308158.10 ENSP00000310978.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308158.10Link to Ensembl Protein Viewer:ENSP00000310978.5Re-query CCDS DB by Nucleotide ID:ENST00000308158Re-query CCDS DB by Protein ID:ENSP00000310978
Original member Current member NCBI NM_153373.4 NP_699204.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153373.4Link to Protein Sequence:NP_699204.1Re-query CCDS DB by Nucleotide ID:NM_153373Re-query CCDS DB by Protein ID:NP_699204Link to BLAST:NP_699204.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_699204.1 450 Q8IUZ5-1 450 100% 0 0

Chromosomal Locations for CCDS 4434.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 178211921 178211970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178212973 178213103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178214796 178214885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178215276 178215430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178222355 178222580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178222852 178222934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178224448 178224564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178224642 178224729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178225355 178225429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178229940 178230099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178231405 178231523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178232492 178232550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1353 nt):
ATGGCCGCAGACCAGCGCCCGAAGGCCGACACGCTGGCCCTGAGGCAACGGCTCATCAGCTCTTCCTGCA
GACTCTTTTTTCCCGAGGATCCTGTTAAGATTGTCCGGGCCCAAGGGCAGTACATGTACGATGAACAGGG
GGCAGAATACATCGATTGCATCAGCAATGTGGCGCACGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCA
GCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTACCTGCATGACAACATCGTGGACTATGCGC
AGAGGCTGTCAGAGACCCTGCCGGAGCAGCTCTGTGTGTTCTATTTCCTGAATTCTGGGTCAGAAGCCAA
TGACCTGGCCCTGAGGCTGGCTCGCCACTACACGGGACACCAGGACGTGGTGGTATTAGATCATGCGTAT
CACGGCCACCTGAGCTCCCTGATTGACATCAGTCCCTACAAGTTCCGCAACCTGGATGGCCAGAAGGAGT
GGGTCCACGTGGCACCTCTCCCAGACACCTACCGGGGCCCCTACCGGGAGGACCACCCCAACCCAGCTAT
GGCCTATGCCAACGAGGTGAAACGTGTGGTCAGCAGTGCACAGGAGAAGGGCAGGAAGATTGCAGCCTTC
TTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCTACTTCTCCCAAGTGGCAG
AGCACATCCGCAAGGCCGGAGGGGTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAA
GCACTTCTGGGCCTTCCAGCTCCAGGGAAAAGACTTCGTCCCTGACATCGTCACCATGGGCAAGTCCATT
GGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCG
TTGAGTACTTCAACACGTTTGGGGGCAGCCCAGTGTCCTGCGCTGTGGGGCTGGCCGTCCTGAATGTCTT
GGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGCTCCTCGGGCAGCAA
AAAATCAAACATCCCATCGTCGGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAG
ATGAGGCCACAAGGACACCAGCAACTGAAGAGGCTGCCTACTTGGTATCAAGGCTGAAGGAGAACTACGT
TTTGCTGAGCACTGATGGCCCTGGGAGGAACATCCTGAAGTTTAAGCCCCCAATGTGCTTCAGCCTGGAC
AATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACTGACATGGAAGAGAAGGTGAGAAGTTGTG
AAACGCTGAGGCTCCAGCCCTAA

Translation (450 aa):
MAADQRPKADTLALRQRLISSSCRLFFPEDPVKIVRAQGQYMYDEQGAEYIDCISNVAHVGHCHPLVVQA
AHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDLALRLARHYTGHQDVVVLDHAY
HGHLSSLIDISPYKFRNLDGQKEWVHVAPLPDTYRGPYREDHPNPAMAYANEVKRVVSSAQEKGRKIAAF
FAESLPSVGGQIIPPAGYFSQVAEHIRKAGGVFVADEIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSI
GNGHPVACVAATQPVARAFEATGVEYFNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQ
KIKHPIVGDVRGVGLFIGVDLIKDEATRTPATEEAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCFSLD
NARQVVAKLDAILTDMEEKVRSCETLRLQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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