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Report for CCDS45490.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45490.1 Public Homo sapiens 16 CES5A 24 110 108 CCDS HistoryNCBI Gene:221223Re-query CCDS DB by CCDS ID:45490.1Re-query CCDS DB by GeneID:221223See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45490.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000290567.14 ENSP00000290567.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000290567.14Link to Ensembl Protein Viewer:ENSP00000290567.9Re-query CCDS DB by Nucleotide ID:ENST00000290567Re-query CCDS DB by Protein ID:ENSP00000290567
Original member Current member NCBI NM_001143685.2 NP_001137157.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001143685.2Link to Protein Sequence:NP_001137157.1Re-query CCDS DB by Nucleotide ID:NM_001143685Re-query CCDS DB by Protein ID:NP_001137157Link to BLAST:NP_001137157.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137157.1 575 Q6NT32-1 575 100% 0 0

Chromosomal Locations for CCDS 45490.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 55846451 55846682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 55846768 55846840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 55849624 55849773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 55852881 55853028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 55856377 55856445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 55859547 55859687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 55861412 55861516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 55863348 55863452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 55865963 55866116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 55869611 55869744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 55871625 55871763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 55873833 55874037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 55875149 55875221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1728 nt):
ATGAGTGGGAATTGGGTGCACCCAGGCCAGATCCTAATTTGGGCTATCTGGGTCCTTGCAGCCCCCACCA
AAGGGCCTTCTGCTGAAGGGCCACAGAGGAACACCAGGCTGGGATGGATTCAGGGCAAGCAAGTCACTGT
GCTGGGAAGCCCTGTGCCTGTGAACGTGTTCCTCGGAGTCCCCTTTGCTGCTCCCCCGCTGGGATCCCTG
CGATTTACGAACCCGCAGCCTGCATCGCCCTGGGATAACTTGCGAGAAGCCACCTCCTACCCTAATTTGT
GCCTCCAGAACTCAGAGTGGCTGCTCTTAGATCAACATATGCTCAAGGTGCATTACCCGAAATTCGGAGT
GTCAGAAGACTGCCTCTACCTGAACATCTATGCGCCTGCCCACGCCGATACAGGCTCCAAGCTCCCCGTC
TTGGTGTGGTTCCCAGGAGGTGCCTTCAAGACTGGCTCAGCCTCCATCTTTGATGGGTCCGCCCTGGCTG
CCTATGAGGACGTGCTGGTTGTGGTCGTCCAGTACCGGCTAGGAATATTTGGTTTCTTCACCACATGGGA
TCAGCATGCTCCGGGGAACTGGGCCTTCAAGGACCAGGTGGCTGCTCTGTCCTGGGTCCAGAAGAACATC
GAGTTCTTCGGTGGGGACCCCAGCTCTGTGACCATCTTTGGCGAGTCCGCGGGAGCCATAAGTGTTTCTA
GTCTTATACTGTCTCCCATGGCCAAAGGCTTATTCCACAAAGCCATCATGGAGAGTGGGGTGGCCATCAT
CCCTTACCTGGAGGCCCATGATTATGAGAAGAGTGAGGACCTGCAGGTGGTTGCACATTTCTGTGGTAAC
AATGCGTCAGACTCTGAGGCCCTGCTGAGGTGCCTGAGGACAAAACCCTCCAAGGAGCTGCTGACCCTCA
GCCAGAAAACAAAGTCTTTCACTCGAGTGGTTGATGGTGCTTTCTTTCCTAATGAGCCTCTAGATCTATT
GTCTCAGAAAGCATTTAAAGCAATTCCTTCCATCATCGGAGTCAATAACCACGAGTGTGGCTTCCTGCTG
CCTATGAAGGAGGCTCCTGAGATCCTCAGTGGCTCCAACAAGTCCCTTGCCCTCCATCTGATACAAAACA
TCCTGCACATCCCGCCTCAGTATTTGCACCTTGTGGCTAATGAATACTTCCATGACAAGCACTCCCTGAC
TGAAATCCGAGACAGTCTTCTGGACTTGCTTGGAGATGTGTTCTTTGTGGTCCCTGCACTGATCACAGCT
CGATATCACAGAGATGCTGGTGCACCTGTCTACTTCTATGAGTTTCGGCACCGGCCTCAGTGCTTTGAAG
ACACGAAGCCAGCTTTTGTCAAAGCCGACCACGCTGATGAAGTCCGCTTTGTGTTCGGTGGTGCCTTCCT
GAAGGGGGACATTGTTATGTTCGAAGGAGCCACGGAGGAGGAGAAGTTACTGAGCCGGAAGATGATGAAA
TACTGGGCTACCTTTGCTCGAACCGGGAATCCTAATGGGAACGACCTGTCTCTGTGGCCAGCTTATAATC
TGACTGAGCAGTACCTCCAGCTGGACTTGAACATGAGCCTCGGACAGAGACTCAAAGAACCGCGGGTGGA
TTTTTGGACCAGCACCATCCCCCTGATCCTGTCTGCCTCCGACATGCTCCACAGTCCTCTTTCTTCCTTA
ACTTTCCTCTCTCTCCTCCAGCCTTTCTTTTTCTTTTGTGCTCCTTGA

Translation (575 aa):
MSGNWVHPGQILIWAIWVLAAPTKGPSAEGPQRNTRLGWIQGKQVTVLGSPVPVNVFLGVPFAAPPLGSL
RFTNPQPASPWDNLREATSYPNLCLQNSEWLLLDQHMLKVHYPKFGVSEDCLYLNIYAPAHADTGSKLPV
LVWFPGGAFKTGSASIFDGSALAAYEDVLVVVVQYRLGIFGFFTTWDQHAPGNWAFKDQVAALSWVQKNI
EFFGGDPSSVTIFGESAGAISVSSLILSPMAKGLFHKAIMESGVAIIPYLEAHDYEKSEDLQVVAHFCGN
NASDSEALLRCLRTKPSKELLTLSQKTKSFTRVVDGAFFPNEPLDLLSQKAFKAIPSIIGVNNHECGFLL
PMKEAPEILSGSNKSLALHLIQNILHIPPQYLHLVANEYFHDKHSLTEIRDSLLDLLGDVFFVVPALITA
RYHRDAGAPVYFYEFRHRPQCFEDTKPAFVKADHADEVRFVFGGAFLKGDIVMFEGATEEEKLLSRKMMK
YWATFARTGNPNGNDLSLWPAYNLTEQYLQLDLNMSLGQRLKEPRVDFWTSTIPLILSASDMLHSPLSSL
TFLSLLQPFFFFCAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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