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Report for CCDS45690.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45690.1 Public Homo sapiens 17 AOC2 24 110 108 CCDS HistoryNCBI Gene:314Re-query CCDS DB by CCDS ID:45690.1Re-query CCDS DB by GeneID:314See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45690.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000452774.2 ENSP00000406134.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000452774.2Link to Ensembl Protein Viewer:ENSP00000406134.1Re-query CCDS DB by Nucleotide ID:ENST00000452774Re-query CCDS DB by Protein ID:ENSP00000406134
Original member Current member NCBI NM_001158.5 NP_001149.2 Accepted alive Link to Nucleotide Sequence:NM_001158.5Link to Protein Sequence:NP_001149.2Re-query CCDS DB by Nucleotide ID:NM_001158Re-query CCDS DB by Protein ID:NP_001149Link to BLAST:NP_001149.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001149.2 729 O75106-2 729 100% 0 0

Chromosomal Locations for CCDS 45690.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 42844627 42846214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42849086 42849290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42849601 42849730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42850082 42850348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2190 nt):
ATGCATCTCAAGATAGTCCTGGCGTTCCTGGCACTGTCCCTCATTACCATCTTTGCCCTGGCCTATGTTT
TGCTGACCAGCCCAGGTGGTTCCAGCCAGCCTCCCCACTGCCCCTCTGTATCCCATAGGGCCCAGCCCTG
GCCACACCCTGGCCAGAGCCAGCTGTTTGCAGACCTGAGCCGAGAGGAGTTGACAGCTGTGATGCGCTTT
CTGACCCAGCGGCTGGGGCCAGGGCTGGTGGACGCAGCCCAGGCTCAGCCCTCGGACAACTGCATCTTCT
CAGTGGAGCTGCAGCTGCCCCCCAAGGCTGCAGCCCTGGCCCACCTGGACAGGGGGAGCCCCCCACCTGC
CCGGGAGGCACTGGCCATCGTCCTCTTTGGTGGACAACCCCAACCCAATGTGAGTGAGCTGGTGGTGGGG
CCGCTGCCTCACCCCTCGTACATGCGGGATGTGACTGTGGAGCGTCACGGCGGGCCCCTGCCCTATCACC
GTCGCCCGGTGCTGAGAGCTGAGTTTACACAGATGTGGAGGCATCTGAAAGAGGTGGAGCTACCCAAGGC
ACCCATCTTCCTGTCGTCCACCTTCAACTACAATGGCTCTACCCTGGCAGCTGTGCATGCCACCCCTCGG
GGCTTGCGCTCAGGGGACCGAGCTACCTGGATGGCCCTCTACCATAACATCTCAGGGGTTGGTCTTTTCC
TTCACCCCGTGGGGCTGGAGCTACTACTGGACCACAGGGCCCTGGACCCTGCCCACTGGACTGTCCAGCA
GGTCTTCTACCTTGGGCACTACTATGCAGACTTGGGCCAGTTGGAACGGGAGTTTAAGTCTGGCCGGTTG
GAAGTGGTTAGAGTCCCTCTACCTCCACCAAATGGAGCTTCATCCCTGAGGTCTCGGAACTCTCCAGGTC
CTCTTCCCCCTCTTCAGTTCTCGCCCCAGGGTTCCCAGTACAGTGTGCAAGGAAACCTGGTGGTATCCTC
CCTCTGGTCATTTACCTTTGGCCATGGGGTGTTCAGCGGCCTGAGGATTTTTGATGTTCGGTTCCAGGGT
GAGCGAATAGCCTATGAAGTCAGTGTCCAGGAGTGTGTATCTATCTATGGTGCCGATTCACCCAAGACGA
TGCTGACTCGCTATTTGGATAGCAGCTTTGGACTCGGCCGTAACAGCCGAGGCTTGGTGCGGGGAGTGGA
CTGCCCCTATCAAGCCACGATGGTGGACATCCATATATTAGTGGGCAAAGGGGCAGTCCAGCTGCTTCCA
GGGGCTGTGTGTGTATTTGAGGAAGCCCAGGGACTGCCCCTTCGAAGGCACCACAATTACCTTCAAAATC
ATTTCTATGGTGGTTTGGCCAGCTCAGCCCTTGTGGTCAGGTCTGTGTCATCTGTGGGCAACTATGACTA
CATTTGGGACTTTGTGTTGTACCCAAATGGGGCACTTGAAGGGCGGGTCCATGCCACGGGTTATATCAAC
ACAGCTTTCCTGAAAGGGGGAGAGGAGGGCCTCCTCTTTGGGAACCGTGTGGGGGAAAGAGTGCTGGGAA
CGGTGCACACACATGCCTTCCACTTCAAGCTGGACCTGGATGTGGCAGGGCTGAAAAACTGGGTGGTAGC
TGAAGACGTGGTGTTTAAACCTGTGGCTGCCCCCTGGAACCCGGAGCACTGGCTACAGCGCCCACAGCTG
ACTCGGCAGGTCCTGGGAAAGGAGGACCTGACAGCTTTTTCCTTGGGAAGCCCCCTACCCCGCTACCTCT
ACCTGGCTAGCAACCAGACTAATGCGTGGGGTCACCAGCGCGGATACCAGCTTGTGGTGACCCAGAGAAA
GGAGGAGGAGTCACAGAGCAGTAGCATCTATCACCAGAATGACATCTGGACACCCACAGTTACCTTTGCT
GACTTCATCAACAATGAAACCCTCTTAGGAGAGGATCTGGTGGCTTGGGTCACAGCCAGCTTCCTGCACA
TTCCCCATGCCGAGGACATCCCAAACACAGTGACTCTGGGGAACAGAGTTGGCTTCTTGCTCCGACCCTA
TAACTTCTTTGATGAGGACCCCTCCATCTTCTCCCCTGGCAGTGTCTACTTTGAGAAGGGCCAGGATGCT
GGGCTCTGCAGCATCAATCCTGTGGCCTGCCTCCCCGACCTGGCAGCCTGTGTCCCGGACTTACCCCCTT
TCTCTTACCACGGCTTCTAG

Translation (729 aa):
MHLKIVLAFLALSLITIFALAYVLLTSPGGSSQPPHCPSVSHRAQPWPHPGQSQLFADLSREELTAVMRF
LTQRLGPGLVDAAQAQPSDNCIFSVELQLPPKAAALAHLDRGSPPPAREALAIVLFGGQPQPNVSELVVG
PLPHPSYMRDVTVERHGGPLPYHRRPVLRAEFTQMWRHLKEVELPKAPIFLSSTFNYNGSTLAAVHATPR
GLRSGDRATWMALYHNISGVGLFLHPVGLELLLDHRALDPAHWTVQQVFYLGHYYADLGQLEREFKSGRL
EVVRVPLPPPNGASSLRSRNSPGPLPPLQFSPQGSQYSVQGNLVVSSLWSFTFGHGVFSGLRIFDVRFQG
ERIAYEVSVQECVSIYGADSPKTMLTRYLDSSFGLGRNSRGLVRGVDCPYQATMVDIHILVGKGAVQLLP
GAVCVFEEAQGLPLRRHHNYLQNHFYGGLASSALVVRSVSSVGNYDYIWDFVLYPNGALEGRVHATGYIN
TAFLKGGEEGLLFGNRVGERVLGTVHTHAFHFKLDLDVAGLKNWVVAEDVVFKPVAAPWNPEHWLQRPQL
TRQVLGKEDLTAFSLGSPLPRYLYLASNQTNAWGHQRGYQLVVTQRKEEESQSSSIYHQNDIWTPTVTFA
DFINNETLLGEDLVAWVTASFLHIPHAEDIPNTVTLGNRVGFLLRPYNFFDEDPSIFSPGSVYFEKGQDA
GLCSINPVACLPDLAACVPDLPPFSYHGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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