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Report for CCDS46372.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46372.1 Public Homo sapiens 2 INPP4A 24 110 108 CCDS HistoryNCBI Gene:3631Re-query CCDS DB by CCDS ID:46372.1Re-query CCDS DB by GeneID:3631See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46372.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409540.7 ENSP00000387294.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409540.7Link to Ensembl Protein Viewer:ENSP00000387294.3Re-query CCDS DB by Nucleotide ID:ENST00000409540Re-query CCDS DB by Protein ID:ENSP00000387294
Original member Current member NCBI NM_001566.2 NP_001557.1 Accepted alive Link to Nucleotide Sequence:NM_001566.2Link to Protein Sequence:NP_001557.1Re-query CCDS DB by Nucleotide ID:NM_001566Re-query CCDS DB by Protein ID:NP_001557Link to BLAST:NP_001557.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001557.1 954 Q96PE3-4 954 100% 0 0

Chromosomal Locations for CCDS 46372.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 98520049 98520154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98520687 98520731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98533377 98533495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98535729 98535845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98536129 98536208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98537863 98537974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98538891 98538981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98539528 98539675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98543877 98544007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98545969 98546073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98546586 98546694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98548955 98548969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98552786 98552969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98554271 98554489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98555553 98555691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98559463 98559495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98563465 98563637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98564640 98564763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98565640 98565766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98566029 98566169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98568571 98568668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98572815 98572927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98576989 98577143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98581576 98581756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2865 nt):
ATGACAGCAAGAGAGCACAGCCCTCGCCATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCATCG
AC
GTGGCGGCCGACATGCTGGGCCTCTCTCTGGCAGGAAATATACAAGACCCAGATGAGCCCATTTTAGA
A
TTTAGCTTAGCTTGCAGTGAGCTGCATACTCCATCGCTAGATCGAAAGCCAAATAGTTTTGTTGCGGTG
AGT
GTCACCACCCCTCCTCAGGCATTCTGGACGAAGCATGCACAGACGGAGATCATTGAGGGAACCAACA
AT
CCTATATTTCTAAGCAGTATTGCCTTCTTTCAAGACTCTCTTATCAATCAGATGACACAAGTCAAACT
C
TCCGTGTATGATGTCAAAGATAGATCTCAGGGAACAATGTATTTACTGGGCTCTGGAACGTTCATTGTC
AAA
GATCTGCTCCAGGACAGGCATCATAGGTTGCATTTAACACTAAGGTCTGCAGAGAGTGACCGTGTAG
GT
AACATCACCGTGATTGGCTGGCAGATGGAGGAGAAGTCAGACCAACGGCCCCCTGTGACCCGGTCTGT
G
GACACTGTCAATGGGAGGATGGTTCTTCCTGTCGATGAGAGCTTGACGGAGGCGTTAGGAATCCGATCC
AAA
TACGCTTCATTGCGAAAGGACACTTTGCTGAAATCGGTGTTCGGTGGTGCCATCTGCCGCATGTACC
GG
TTTCCAACCACTGATGGTAACCATTTGCGGATCCTGGAGCAGATGGCAGAGAGCGTGCTCTCCCTGCA
C
GTGCCCCGGCAGTTCGTGAAGCTCCTACTAGAGGAAGATGCAGCCAGAGTGTGTGAGCTGGAGGAGCTG
GGA
GAGCTGTCCCCTTGCTGGGAGAGCCTCCGGCGCCAAATTGTCACCCAGTACCAGACCATCATCCTCA
CA
TACCAGGAGAACCTGACCGACCTCCATCAGTACAGAGGGCCCTCGTTTAAAGCAAGCAGTTTGAAAGC
A
GATAAAAAGTTAGAATTTGTTCCCACAAACTTGCACATACAAAGGATGAGAGTTCAAGACGATGGAGGA
TCA
GATCAGAACTACGACATCGTCACCATTGGGGCGCCAGCAGCACACTGCCAAGGTTTTAAGTCAGGAG
GT
CTCCGCAAAAAGCTGCACAAATTTGAAGAGACCAAGAAACATTTTGAGGAGTGTTGTACATCATCTGG
C
TGCCAGTCCATAATCTACATACCCCAGGATGTTGTCAGAGCCAAGGAGATCATCGCCCAGATCAACACC
CTG
AAAACCCAAGTGAGTTACTACGCAGAGCGGCTGTCAAGGGCAGCCAAGGACAGGTCTGCCACTGGCC
TT
GAGAGGACACTCGCCATCTTGGCAGACAAGACACGGCAGCTGGTCACGGTCTGCGACTGCAAGCTCCT
G
GCCAACTCCATCCATGGGCTGAACGCTGCACGGCCTGACTACATTGCCTCCAAGGCCTCTCCCACTTCG
ACT
GAGGAGGAGCAGGTGATGCTTAGAAATGACCAGGACACCCTCATGGCCCGGTGGACAGGGAGAAACA
GC
CGATCTTCCCTGCAGGTGGACTGGCACGAGGAGGAGTGGGAGAAAGTGTGGCTGAACGTGGACAAGAG
C
CTAGAGTGCATCATTCAGCGTGTGGACAAGCTGCTGCAGAAGGAGCGGCTGCATGGCGAGGGCTGTGAG
GAT
GTCTTCCCCTGTGCAGGCAGCTGCACCAGCAAGAAAGATTGCAGTCCCCCTCCTGAAGAGTCCAGCC
CA
GGTGAATGGAGTGAGGCCCTTTACCCGCTGCTGACCACTCTCACCGACTGCGTGGCCATGATGAGTGA
C
AAGGCCAAGAAGGCCATGGTATTCCTGCTCATGCAGGACAGCGCGCCCACCATAGCCACCTACCTGAGC
CTG
CAGTACCGCCGTGACGTGGTCTTCTGCCAGACGCTGACCGCCCTCATCTGCGGCTTCATCATTAAGC
TG
AGGAACTGCCTGCATGACGACGGCTTCCTGCGCCAGCTCTACACCATCGGGCTGCTGGCCCAGTTCGA
G
AGCCTGCTGAGCACCTACGGGGAGGAGCTGGCAATGCTGGAGGACATGAGCCTTGGGATCATGGACTTG
AGG
AACGTGACCTTCAAAGTCACTCAGGCCACTTCCAGCGCCTCCGCAGACATGCTGCCCGTCATCACAG
GA
AATCGCGACGGGTTTAACGTGCGGGTCCCTCTGCCGGGCCCGCTGTTTGACGCCTTGCCCCGGGAGAT
C
CAGAGTGGCATGCTGCTGCGAGTGCAGCCCGTCCTCTTCAACGTGGGCATCAATGAGCAGCAGACACTG
GCC
GAGAGGTTTGGCGATACGTCTTTACAAGAAGTCATCAACGTGGAGAGTTTGGTGCGGTTAAATTCCT
AC
TTTGAGCAGTTTAAGGAAGTTTTGCCTGAGGATTGCCTGCCTCGGTCTCGCAGTCAGACGTGCCTGCC
A
GAGCTGCTGCGGTTTCTGGGTCAGAACGTGCATGCCCGGAAGAATAAGAACGTCGACATTCTCTGGCAA
GCT
GCTGAGATCTGCCGCCGCCTTAATGGGGTCCGGTTCACCAGCTGCAAGAGCGCTAAGGACCGTACAG
CC
ATGTCGGTGACACTGGAGCAGTGCCTGATCCTGCAACACGAGCATGGCATGGCCCCGCAGGTCTTCAC
C
CAGGCCCTGGAGTGCATGCGCAGCATTGGAACACGGGAGGTAGTCACCCAGAAGAACTTGAGCGGCCTG
GTG
CCCATCCGAGACTTAAGGCTAGACCCCAGCCTCCTCTGTTCCATCCCTTTATTAGCTCTGAGCCCCA
AT
TTACTGATTGTGTGGCTCTTTCTGAGCATAGCATACCTGGTGACCAAATTGCGTTGCAAATGA


Translation (954 aa):
MTAREHSPRHGARARAMQRASTIDVAADMLGLSLAGNIQDPDEPILEFSLACSELHTPSLDRKPNSFVAV
S
VTTPPQAFWTKHAQTEIIE
GTNNPIFLSSIAFFQDSLINQMTQVKLSVYDVKDRSQGTMYLLGSGTFIV
K
DLLQDRHHRLHLTL
RSAESDRVGNITVIGWQMEEKSDQRPPVTRSVDTVNGRMVLPVDESLTEALGIRS
K
YASLRKDTLLKS
VFGGAICRMYRFPTTDGNHLRILEQMAESVLSLHVPRQFVKLLLEEDAARVCELEEL
G
ELSPCWESLRRQIVTQYQTIILTYQENLTDLHQYR
GPSFKASSLKADKKLEFVPTNLHIQRMRVQDDGG
S
DQNYDIVTIGAPAAHCQGFKSGGLRKKLHKFEETKKHFEECCTSSGCQSIIYIPQDVVRAKEIIAQINT
L
KTQVSYYAERLSRAAKDRSATGLERTLAILADK
TRQLVTVCDCKLLANSIHGLNAARPDYIASKASPTS
T
EEEQVMLRNDQDTLMARWTGRNSRSSLQVDWHEEEW
EKVWLNVDKSLECIIQRVDKLLQKERLHGEGCE
D
VFPCAGSCTSKK
DCSPPPEESSPGEWSEALYPLLTTLTDCVAMMSDKAKKAMVFLLMQDSAPTIATYLS
L
QYRRDVVFCQT
LTALICGFIIKLRNCLHDDGFLRQLYTIGLLAQFESLLSTYGEELAMLEDMSLGIMDL
R
NVTFKVTQATSSASADMLPVITGN
RDGFNVRVPLPGPLFDALPREIQSGMLLRVQPVLFNVGINEQQTL
A
E
RFGDTSLQEVINVESLVRLNSYFEQFKEVLPEDCLPRSRSQTCLPELLRFLGQNVHARKNKNVDILWQ
A
AE
ICRRLNGVRFTSCKSAKDRTAMSVTLEQCLILQHEHGMAPQVFTQALECMRSIGTREVVTQKNLSGL
V
PIRDLRLDPSLLCSIPLLALSPNLLIVWLFLSIAYLVTKLRCK




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser