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Report for CCDS46444.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46444.1 Public Homo sapiens 2 ABCB11 24 110 108 CCDS HistoryNCBI Gene:8647Re-query CCDS DB by CCDS ID:46444.1Re-query CCDS DB by GeneID:8647See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46444.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000650372.1 ENSP00000497931.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000650372.1Link to Ensembl Protein Viewer:ENSP00000497931.1Re-query CCDS DB by Nucleotide ID:ENST00000650372Re-query CCDS DB by Protein ID:ENSP00000497931
Original member Current member NCBI NM_003742.4 NP_003733.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003742.4Link to Protein Sequence:NP_003733.2Re-query CCDS DB by Nucleotide ID:NM_003742Re-query CCDS DB by Protein ID:NP_003733Link to BLAST:NP_003733.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003733.2 1321 O95342 1321 100% 0 0

Chromosomal Locations for CCDS 46444.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 168923622 168923822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168924657 168924803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168927156 168927362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168930665 168930862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168932377 168932533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168935184 168935425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168936230 168936433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168944605 168944766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168944857 168944961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168957964 168958128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168964206 168964308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168968427 168968490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168969350 168969551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168970045 168970215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168971847 168972050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168973715 168973840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168976577 168976687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168979866 168979979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168986110 168986284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168990801 168990925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168993711 168993882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168995349 168995482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168996635 168996722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169013272 169013510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169014303 169014354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169016778 169016799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169018050 169018125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3966 nt):
ATGTCTGACTCAGTAATTCTTCGAAGTATAAAGAAATTTGGAGAGGAGAATGATGGTTTTGAGTCAGATA
AATCATATAATAATGATAAGAAATCAAGGTTACAAGATGAGAAGAAAGGTGATGGCGTTAGAGTTGGCTT
CTTTCAATTGTTTCGGTTTTCTTCATCAACTGACATTTGGCTGATGTTTGTGGGAAGTTTGTGTGCATTT
CTCCATGGAATAGCCCAGCCAGGCGTGCTACTCATTTTTGGCACAATGACAGATGTTTTTATTGACTACG
ACGTTGAGTTACAAGAACTCCAGATTCCAGGAAAAGCATGTGTGAATAACACCATTGTATGGACTAACAG
TTCCCTCAACCAGAACATGACAAATGGAACACGTTGTGGGTTGCTGAACATCGAGAGCGAAATGATCAAA
TTTGCCAGTTACTATGCTGGAATTGCTGTCGCAGTACTTATCACAGGATATATTCAAATATGCTTTTGGG
TCATTGCCGCAGCTCGTCAGATACAGAAAATGAGAAAATTTTACTTTAGGAGAATAATGAGAATGGAAAT
AGGGTGGTTTGACTGCAATTCAGTGGGGGAGCTGAATACAAGATTCTCTGATGATATTAATAAAATCAAT
GATGCCATAGCTGACCAAATGGCCCTTTTCATTCAGCGCATGACCTCGACCATCTGTGGTTTCCTGTTGG
GATTTTTCAGGGGTTGGAAACTGACCTTGGTTATTATTTCTGTCAGCCCTCTCATTGGGATTGGAGCAGC
CACCATTGGTCTGAGTGTGTCCAAGTTTACGGACTATGAGCTGAAGGCCTATGCCAAAGCAGGGGTGGTG
GCTGATGAAGTCATTTCATCAATGAGAACAGTGGCTGCTTTTGGTGGTGAGAAAAGAGAGGTTGAAAGGT
ATGAGAAAAATCTTGTGTTCGCCCAGCGTTGGGGAATTAGAAAAGGAATAGTGATGGGATTCTTTACTGG
ATTCGTGTGGTGTCTCATCTTTTTGTGTTATGCACTGGCCTTCTGGTACGGCTCCACACTTGTCCTGGAT
GAAGGAGAATATACACCAGGAACCCTTGTCCAGATTTTCCTCAGTGTCATAGTAGGAGCTTTAAATCTTG
GCAATGCCTCTCCTTGTTTGGAAGCCTTTGCAACTGGACGTGCAGCAGCCACCAGCATTTTTGAGACAAT
AGACAGGAAACCCATCATTGACTGCATGTCAGAAGATGGTTACAAGTTGGATCGAATCAAGGGTGAAATT
GAATTCCATAATGTGACCTTCCATTATCCTTCCAGACCAGAGGTGAAGATTCTAAATGACCTCAACATGG
TCATTAAACCAGGGGAAATGACAGCTCTGGTAGGACCCAGTGGAGCTGGAAAAAGTACAGCACTGCAACT
CATTCAGCGATTCTATGACCCCTGTGAAGGAATGGTGACCGTGGATGGCCATGACATTCGCTCTCTTAAC
ATTCAGTGGCTTAGAGATCAGATTGGGATAGTGGAGCAAGAGCCAGTTCTGTTCTCTACCACCATTGCAG
AAAATATTCGCTATGGCAGAGAAGATGCAACAATGGAAGACATAGTCCAAGCTGCCAAGGAGGCCAATGC
CTACAACTTCATCATGGACCTGCCACAGCAATTTGACACCCTTGTTGGAGAAGGAGGAGGCCAGATGAGT
GGTGGCCAGAAACAAAGGGTAGCTATCGCCAGAGCCCTCATCCGAAATCCCAAGATTCTGCTTTTGGACA
TGGCCACCTCAGCTCTGGACAATGAGAGTGAAGCCATGGTGCAAGAAGTGCTGAGTAAGATTCAGCATGG
GCACACAATCATTTCAGTTGCTCATCGCTTGTCTACGGTCAGAGCTGCAGATACCATCATTGGTTTTGAA
CATGGCACTGCAGTGGAAAGAGGGACCCATGAAGAATTACTGGAAAGGAAAGGTGTTTACTTCACTCTAG
TGACTTTGCAAAGCCAGGGAAATCAAGCTCTTAATGAAGAGGACATAAAGGATGCAACTGAAGATGACAT
GCTTGCGAGGACCTTTAGCAGAGGGAGCTACCAGGATAGTTTAAGGGCTTCCATCCGGCAACGCTCCAAG
TCTCAGCTTTCTTACCTGGTGCACGAACCTCCATTAGCTGTTGTAGATCATAAGTCTACCTATGAAGAAG
ATAGAAAGGACAAGGACATTCCTGTGCAGGAAGAAGTTGAACCTGCCCCAGTTAGGAGGATTCTGAAATT
CAGTGCTCCAGAATGGCCCTACATGCTGGTAGGGTCTGTGGGTGCAGCTGTGAACGGGACAGTCACACCC
TTGTATGCCTTTTTATTCAGCCAGATTCTTGGGACTTTTTCAATTCCTGATAAAGAGGAACAAAGGTCAC
AGATCAATGGTGTGTGCCTACTTTTTGTAGCAATGGGCTGTGTATCTCTTTTCACCCAATTTCTACAGGG
ATATGCCTTTGCTAAATCTGGGGAGCTCCTAACAAAAAGGCTACGTAAATTTGGTTTCAGGGCAATGCTG
GGGCAAGATATTGCCTGGTTTGATGACCTCAGAAATAGCCCTGGAGCATTGACAACAAGACTTGCTACAG
ATGCTTCCCAAGTTCAAGGGGCTGCCGGCTCTCAGATCGGGATGATAGTCAATTCCTTCACTAACGTCAC
TGTGGCCATGATCATTGCCTTCTCCTTTAGCTGGAAGCTGAGCCTGGTCATCTTGTGCTTCTTCCCCTTC
TTGGCTTTATCAGGAGCCACACAGACCAGGATGTTGACAGGATTTGCCTCTCGAGATAAGCAGGCCCTGG
AGATGGTGGGACAGATTACAAATGAAGCCCTCAGTAACATCCGCACTGTTGCTGGAATTGGAAAGGAGAG
GCGGTTCATTGAAGCACTTGAGACTGAGCTGGAGAAGCCCTTCAAGACAGCCATTCAGAAAGCCAATATT
TACGGATTCTGCTTTGCCTTTGCCCAGTGCATCATGTTTATTGCGAATTCTGCTTCCTACAGATATGGAG
GTTACTTAATCTCCAATGAGGGGCTCCATTTCAGCTATGTGTTCAGGGTGATCTCTGCAGTTGTACTGAG
TGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTTATGCAAAAGCTAAAATATCAGCTGCACGC
TTTTTTCAACTGCTGGACCGACAACCCCCAATCAGTGTATACAATACTGCAGGTGAAAAATGGGACAACT
TCCAGGGGAAGATTGATTTTGTTGATTGTAAATTTACATATCCTTCTCGACCTGACTCGCAAGTTCTGAA
TGGTCTCTCAGTGTCGATTAGTCCAGGGCAGACACTGGCGTTTGTTGGGAGCAGTGGATGTGGCAAAAGC
ACTAGCATTCAGCTGTTGGAACGTTTCTATGATCCTGATCAAGGGAAGGTGATGATAGATGGTCATGACA
GCAAAAAAGTAAATGTCCAGTTCCTCCGCTCAAACATTGGAATTGTTTCCCAGGAACCAGTGTTGTTTGC
CTGTAGCATAATGGACAATATCAAGTATGGAGACAACACCAAAGAAATTCCCATGGAAAGAGTCATAGCA
GCTGCAAAACAGGCTCAGCTGCATGATTTTGTCATGTCACTCCCAGAGAAATATGAAACTAACGTTGGGT
CCCAGGGGTCTCAACTCTCTAGAGGGGAGAAACAACGCATTGCTATTGCTCGGGCCATTGTACGAGATCC
TAAAATCTTGCTACTAGATGAAGCCACTTCTGCCTTAGACACAGAAAGTGAAAAGACGGTGCAGGTTGCT
CTAGACAAAGCCAGAGAGGGTCGGACCTGCATTGTCATTGCCCATCGCTTGTCCACCATCCAGAACGCGG
ATATCATTGCTGTCATGGCACAGGGGGTGGTGATTGAAAAGGGGACCCATGAAGAACTGATGGCCCAAAA
AGGAGCCTACTACAAACTAGTCACCACTGGATCCCCCATCAGTTGA

Translation (1321 aa):
MSDSVILRSIKKFGEENDGFESDKSYNNDKKSRLQDEKKGDGVRVGFFQLFRFSSSTDIWLMFVGSLCAF
LHGIAQPGVLLIFGTMTDVFIDYDVELQELQIPGKACVNNTIVWTNSSLNQNMTNGTRCGLLNIESEMIK
FASYYAGIAVAVLITGYIQICFWVIAAARQIQKMRKFYFRRIMRMEIGWFDCNSVGELNTRFSDDINKIN
DAIADQMALFIQRMTSTICGFLLGFFRGWKLTLVIISVSPLIGIGAATIGLSVSKFTDYELKAYAKAGVV
ADEVISSMRTVAAFGGEKREVERYEKNLVFAQRWGIRKGIVMGFFTGFVWCLIFLCYALAFWYGSTLVLD
EGEYTPGTLVQIFLSVIVGALNLGNASPCLEAFATGRAAATSIFETIDRKPIIDCMSEDGYKLDRIKGEI
EFHNVTFHYPSRPEVKILNDLNMVIKPGEMTALVGPSGAGKSTALQLIQRFYDPCEGMVTVDGHDIRSLN
IQWLRDQIGIVEQEPVLFSTTIAENIRYGREDATMEDIVQAAKEANAYNFIMDLPQQFDTLVGEGGGQMS
GGQKQRVAIARALIRNPKILLLDMATSALDNESEAMVQEVLSKIQHGHTIISVAHRLSTVRAADTIIGFE
HGTAVERGTHEELLERKGVYFTLVTLQSQGNQALNEEDIKDATEDDMLARTFSRGSYQDSLRASIRQRSK
SQLSYLVHEPPLAVVDHKSTYEEDRKDKDIPVQEEVEPAPVRRILKFSAPEWPYMLVGSVGAAVNGTVTP
LYAFLFSQILGTFSIPDKEEQRSQINGVCLLFVAMGCVSLFTQFLQGYAFAKSGELLTKRLRKFGFRAML
GQDIAWFDDLRNSPGALTTRLATDASQVQGAAGSQIGMIVNSFTNVTVAMIIAFSFSWKLSLVILCFFPF
LALSGATQTRMLTGFASRDKQALEMVGQITNEALSNIRTVAGIGKERRFIEALETELEKPFKTAIQKANI
YGFCFAFAQCIMFIANSASYRYGGYLISNEGLHFSYVFRVISAVVLSATALGRAFSYTPSYAKAKISAAR
FFQLLDRQPPISVYNTAGEKWDNFQGKIDFVDCKFTYPSRPDSQVLNGLSVSISPGQTLAFVGSSGCGKS
TSIQLLERFYDPDQGKVMIDGHDSKKVNVQFLRSNIGIVSQEPVLFACSIMDNIKYGDNTKEIPMERVIA
AAKQAQLHDFVMSLPEKYETNVGSQGSQLSRGEKQRIAIARAIVRDPKILLLDEATSALDTESEKTVQVA
LDKAREGRTCIVIAHRLSTIQNADIIAVMAQGVVIEKGTHEELMAQKGAYYKLVTTGSPIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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