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Report for CCDS47842.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47842.1 Public Homo sapiens 8 PLPP5 24 110 108 CCDS HistoryNCBI Gene:84513Re-query CCDS DB by CCDS ID:47842.1Re-query CCDS DB by GeneID:84513See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47842.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000422581.6 ENSP00000390622.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000422581.6Link to Ensembl Protein Viewer:ENSP00000390622.2Re-query CCDS DB by Nucleotide ID:ENST00000422581Re-query CCDS DB by Protein ID:ENSP00000390622
Original member Current member NCBI NM_032483.4 NP_115872.2 Accepted alive Link to Nucleotide Sequence:NM_032483.4Link to Protein Sequence:NP_115872.2Re-query CCDS DB by Nucleotide ID:NM_032483Re-query CCDS DB by Protein ID:NP_115872Link to BLAST:NP_115872.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115872.2 216 Q8NEB5-2 216 100% 0 0

Chromosomal Locations for CCDS 47842.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 38264933 38264949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38266141 38266311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38267267 38267391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38267897 38267960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38268371 38268461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38268882 38268990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38269126 38269199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (651 nt):
ATGGGGAAGGCGGCGGCGGCGGTGGCCTTTGGGGCCGAAGTGGGCGTGCGGCTCGCGCTGTTCGCGGCCT
TCCTGGTGACGGAGCTGCTCCCCCCGTTCCAGAGACTCATCCAGCCGGAGGAGATGTGGCTCTACCGGAA
CCCCTACGTGGAGGCGGAGTATTTCCCCACCAAGCCGATGTTTGTTATTGCATTTCTCTCTCCACTGTCT
CTGATCTTCCTGGCCAAATTTCTCAAGAAGGCAGACACAAGAGACAGCAGACAAGCCTGCCTGGCTGCCA
GCCTTGCCCTGGCTCTGAATGGCGTCTTTACCAACACAATAAAACTGATCGTAGGGAGGCCACGCCCAGA
TTTCTTCTACCGCTGCTTCCCTGATGGGCTAGCCCATTCTGACTTGATGTGTACAGGGGATAAGGACGTG
GTGAATGAGGGCCGAAAGAGCTTCCCCAGTGGACATTCTTCCTTTGCATTTGCTGGTCTGGCCTTTGCGT
CCTTCTACCTGGCAGGGAAGTTACACTGCTTCACACCACAAGGCCGTGGGAAATCTTGGAGGTTCTGTGC
CTTTCTGTCACCTCTACTTTTTGCAGCTGTGATTGCACTGTCCCGCACATGTGACTACAAGCATCACTGG
CAAGGACCCTTTAAATGGTGA

Translation (216 aa):
MGKAAAAVAFGAEVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFPTKPMFVIAFLSPLS
LIFLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFYRCFPDGLAHSDLMCTGDKDV
VNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPLLFAAVIALSRTCDYKHHW
QGPFKW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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