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Report for CCDS48030.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48030.1 Public Homo sapiens 9 PIP5KL1 24 110 108 CCDS HistoryNCBI Gene:138429Re-query CCDS DB by CCDS ID:48030.1Re-query CCDS DB by GeneID:138429See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48030.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000388747.9 ENSP00000373399.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000388747.9Link to Ensembl Protein Viewer:ENSP00000373399.4Re-query CCDS DB by Nucleotide ID:ENST00000388747Re-query CCDS DB by Protein ID:ENSP00000373399
Original member Current member NCBI NM_001135219.2 NP_001128691.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001135219.2Link to Protein Sequence:NP_001128691.1Re-query CCDS DB by Nucleotide ID:NM_001135219Re-query CCDS DB by Protein ID:NP_001128691Link to BLAST:NP_001128691.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128691.1 394 Q5T9C9-1 394 100% 0 0

Chromosomal Locations for CCDS 48030.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 127921847 127922114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127925107 127925260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127925867 127925979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127927153 127927208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127927297 127927331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127927648 127927772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127928065 127928219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127928433 127928483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127929688 127929885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127930723 127930752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1185 nt):
ATGGCTGCGCCGAGCCCGGGGCCCCGCGAGGTCCTGGCCCCCTCCCCTGAGGCTGGATGCAGAGCAGTCA
CCTCCAGCCGGCGGGGGCTTCTCTGGCGCCTCCGAGACAAGCAGTCTCGCCTGGGCCTGTTTGAGATCAG
CCCGGGGCATGAACTGCATGGGATGACGTGCATGATGCAGGCAGGGCTGTGGGCTGCCACCCAGGTCTCC
ATGGACCACCCACCCACGGGGCCGCCCTCCCGGGACGATTTCTCGGAGGTCCTAACCCAGGTTCACGAGG
GCTTCGAGCTGGGCACGCTGGCCGGCCCCGCCTTTGCCTGGCTGCGCCGCTCCCTGGGCCTGGCGGAGGA
GGACTATCAGGCTGCCCTGGGCCCCGGCGGCCCCTACCTGCAGTTCCTCAGCACCTCCAAGAGCAAGGCC
AGCTTCTTCCTGTCCCACGACCAGCGCTTCTTCCTGAAGACCCAGGGGCGCCGAGAGGTGCAGGCTCTGC
TCGCCCACCTGCCCCGCTACGTGCAGCACCTGCAGCGGCACCCGCACTCGCTGCTGGCGCGGTTGCTGGG
AGTGCACAGTCTGCGGGTGGACCGGGGAAAGAAGACGTACTTCATCGTCATGCAGAGCGTCTTCTACCCC
GCCGGCCGCATCTCCGAGAGGTATGACATCAAAGGCTGCGAGGTGAGCCGCTGGGTGGATCCCGCCCCTG
AGGGCAGCCCCCTTGTTCTGGTGCTGAAGGACCTCAACTTTCAGGGCAAGACCATCAACCTGGGGCCCCA
GCGGAGCTGGTTCCTCCGCCAGATGGAACTGGATACCACCTTCCTCCGGGAGCTCAACGTGCTGGATTAC
AGCCTCCTGATAGCCTTCCAACGTCTCCACGAGGATGAGAGGGGCCCGGGCAGCAGCCTCATCTTCCGCA
CGGCCAGGTCTGTGCAAGGGGCACAGAGCCCGGAAGAGTCGAGAGCCCAAAACCGCCGGCTGCTGCCCGA
CGCCCCCAACGCCCTACACATCCTGGACGGGCCCGAGCAGCGCTATTTCCTGGGCGTCGTGGATCTCGCC
ACAGTCTACGGGCTCCGCAAGCGGCTGGAGCACCTGTGGAAGACACTGCGCTACCCAGGCCGGACCTTCT
CCACTGTCAGCCCGGCTCGCTACGCCCGTCGCCTCTGCCAGTGGGTGGAGGCGCACACGGAGTGA

Translation (394 aa):
MAAPSPGPREVLAPSPEAGCRAVTSSRRGLLWRLRDKQSRLGLFEISPGHELHGMTCMMQAGLWAATQVS
MDHPPTGPPSRDDFSEVLTQVHEGFELGTLAGPAFAWLRRSLGLAEEDYQAALGPGGPYLQFLSTSKSKA
SFFLSHDQRFFLKTQGRREVQALLAHLPRYVQHLQRHPHSLLARLLGVHSLRVDRGKKTYFIVMQSVFYP
AGRISERYDIKGCEVSRWVDPAPEGSPLVLVLKDLNFQGKTINLGPQRSWFLRQMELDTTFLRELNVLDY
SLLIAFQRLHEDERGPGSSLIFRTARSVQGAQSPEESRAQNRRLLPDAPNALHILDGPEQRYFLGVVDLA
TVYGLRKRLEHLWKTLRYPGRTFSTVSPARYARRLCQWVEAHTE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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