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Report for CCDS48100.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48100.1 Public Homo sapiens X NDUFB11 24 110 108 CCDS HistoryNCBI Gene:54539Re-query CCDS DB by CCDS ID:48100.1Re-query CCDS DB by GeneID:54539See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48100.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377811.4 ENSP00000367042.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377811.4Link to Ensembl Protein Viewer:ENSP00000367042.3Re-query CCDS DB by Nucleotide ID:ENST00000377811Re-query CCDS DB by Protein ID:ENSP00000367042
Original member Current member NCBI NM_001135998.3 NP_001129470.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001135998.3Link to Protein Sequence:NP_001129470.1Re-query CCDS DB by Nucleotide ID:NM_001135998Re-query CCDS DB by Protein ID:NP_001129470Link to BLAST:NP_001129470.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129470.1 153 Q9NX14-1 153 100% 0 0

Chromosomal Locations for CCDS 48100.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 47142317 47142440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47142614 47142744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47144473 47144679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (462 nt):
ATGGCGGCTGGGCTGTTTGGTTTGAGCGCTCGCCGTCTTTTGGCGGCAGCGGCGACGCGAGGGCTCCCGG
CC
GCCCGCGTCCGCTGGGAATCTAGCTTCTCCAGGACTGTGGTCGCCCCGTCCGCTGTGGCGGGAAAGCG
G
CCCCCAGAACCGACCACACCGTGGCAAGAGGACCCAGAACCCGAGGACGAAAACTTGTATGAGAAGAAC
CCA
GACTCCCATGGTTATGACAAGGACCCCGTTTTGGACGTCTGGAACATGCGACTTGTCTTCTTCTTTG
GC
GTCTCCATCATCCTGGTCCTTGGCAGCACCTTTGTGGCCTATCTGCCTGACTACAGGATGAAAGAGTG
G
TCCCGCCGCGAAGCTGAGAGGCTTGTGAAATACCGAGAGGCCAATGGCCTTCCCATCATGGAATCCAAC
TGC
TTCGACCCCAGCAAGATCCAGCTGCCAGAGGATGAGTGA


Translation (153 aa):
MAAGLFGLSARRLLAAAATRGLPAARVRWESSFSRTVVAPSAVAGKRPPEPTTPWQEDPEPEDENLYEKN
P
DSHGYDKDPVLDVWNMRLVFFFGVSIILVLGSTFVAYLPDY
RMKEWSRREAERLVKYREANGLPIMESN
C
FDPSKIQLPEDE




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser