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Report for CCDS4864.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4864.1 Public Homo sapiens 6 GUCA1ANB-GUCA1A 24 110 108 CCDS HistoryNCBI Gene:118142757Re-query CCDS DB by CCDS ID:4864.1Re-query CCDS DB by GeneID:118142757See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4864.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372958.2 ENSP00000362049.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372958.2Link to Ensembl Protein Viewer:ENSP00000362049.1Re-query CCDS DB by Nucleotide ID:ENST00000372958Re-query CCDS DB by Protein ID:ENSP00000362049
Original member Current member EBI ENST00000654459.1 ENSP00000499539.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000654459.1Link to Ensembl Protein Viewer:ENSP00000499539.1Re-query CCDS DB by Nucleotide ID:ENST00000654459Re-query CCDS DB by Protein ID:ENSP00000499539
Original member Current member NCBI NM_000409.5 NP_000400.2 Accepted alive Link to Nucleotide Sequence:NM_000409.5Link to Protein Sequence:NP_000400.2Re-query CCDS DB by Nucleotide ID:NM_000409Re-query CCDS DB by Protein ID:NP_000400Link to BLAST:NP_000400.2
Original member Current member NCBI NM_001319061.2 NP_001305990.1 Accepted alive Link to Nucleotide Sequence:NM_001319061.2Link to Protein Sequence:NP_001305990.1Re-query CCDS DB by Nucleotide ID:NM_001319061Re-query CCDS DB by Protein ID:NP_001305990Link to BLAST:NP_001305990.1
Original member Current member NCBI NM_001319062.2 NP_001305991.1 Accepted alive Link to Nucleotide Sequence:NM_001319062.2Link to Protein Sequence:NP_001305991.1Re-query CCDS DB by Nucleotide ID:NM_001319062Re-query CCDS DB by Protein ID:NP_001305991Link to BLAST:NP_001305991.1
Original member Current member NCBI NM_001384910.1 NP_001371839.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001384910.1Link to Protein Sequence:NP_001371839.1Re-query CCDS DB by Nucleotide ID:NM_001384910Re-query CCDS DB by Protein ID:NP_001371839Link to BLAST:NP_001371839.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000400.2 201 P43080 201 100% 0 0
NP_001305990.1 201 P43080 201 100% 0 0
NP_001305991.1 201 P43080 201 100% 0 0
NP_001371839.1 201 P43080 201 100% 0 0

Chromosomal Locations for CCDS 4864.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 42173614 42173814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42178280 42178429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42178802 42178895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42179243 42179403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (606 nt):
ATGGGCAACGTGATGGAGGGAAAGTCAGTGGAGGAGCTGAGCAGCACCGAGTGCCACCAGTGGTACAAGA
AGTTCATGACTGAGTGCCCCTCTGGCCAACTCACCCTCTATGAGTTCCGCCAGTTCTTCGGCCTCAAGAA
CCTGAGCCCGTCGGCCAGCCAGTACGTGGAACAGATGTTTGAGACTTTTGACTTCAACAAGGACGGCTAC
ATTGATTTCATGGAGTACGTGGCAGCGCTCAGCTTGGTCCTCAAGGGGAAGGTGGAACAGAAGCTCCGCT
GGTACTTCAAGCTCTATGATGTAGATGGCAACGGCTGCATTGACCGCGATGAGCTGCTCACCATCATCCA
GGCCATTCGCGCCATTAACCCCTGCAGCGATACCACCATGACTGCAGAGGAGTTCACCGATACAGTGTTC
TCCAAGATTGACGTCAACGGGGATGGGGAACTCTCCCTGGAAGAGTTTATAGAGGGCGTCCAGAAGGACC
AGATGCTCCTGGACACACTGACACGAAGCCTGGACCTTACCCGCATCGTGCGCAGGCTCCAGAATGGCGA
GCAAGACGAGGAGGGGGCTGACGAGGCCGCTGAGGCAGCCGGCTGA

Translation (201 aa):
MGNVMEGKSVEELSSTECHQWYKKFMTECPSGQLTLYEFRQFFGLKNLSPSASQYVEQMFETFDFNKDGY
IDFMEYVAALSLVLKGKVEQKLRWYFKLYDVDGNGCIDRDELLTIIQAIRAINPCSDTTMTAEEFTDTVF
SKIDVNGDGELSLEEFIEGVQKDQMLLDTLTRSLDLTRIVRRLQNGEQDEEGADEAAEAAG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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