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Report for CCDS50603.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50603.1 Public Mus musculus 2 Cybrd1 23 108 98 CCDS HistoryNCBI Gene:73649Re-query CCDS DB by CCDS ID:50603.1Re-query CCDS DB by GeneID:73649See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50603.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028403.2 ENSMUSP00000028403.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028403.2Link to Ensembl Protein Viewer:ENSMUSP00000028403.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000028403Re-query CCDS DB by Protein ID:ENSMUSP00000028403
Original member Current member NCBI NM_028593.2 NP_082869.2 Accepted alive Link to Nucleotide Sequence:NM_028593.2Link to Protein Sequence:NP_082869.2Re-query CCDS DB by Nucleotide ID:NM_028593Re-query CCDS DB by Protein ID:NP_082869Link to BLAST:NP_082869.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082869.2 290 Q925G2-1 290 100% 0 0

Chromosomal Locations for CCDS 50603.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 71118120 71118312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71129653 71129861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71137489 71137643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71138342 71138657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (873 nt):
ATGGCCATGGAGGGCTACCGGGGCTTCCTGGGGCTGCTGGTGTCCGCGCTGCTCGTGGGCTTCCTGTCGG
TGATCTTCGTGCTCATCTGGGTCCTGCACTTCCGAGAGGGGCTTGGCTGGAACGGCAGCGGGCTCGAGTT
TAACTGGCACCCGGTGCTCGCGGTGACCGGCTTCGTCTTCATCCAGGGCATCGCCATCATCGTGTACAGA
CTGCCATGGACCTGGAAGTGCAGCAAGCTCTTGATGAAATCCATCCATGCCGGGTTAAACGCTGTGGCTG
CCATCCTCGCCATCATCTCCGTGGTGGCTGTGTTTGAGTACCACAATGTCCAAAAAGTCCCCCACATGTA
CAGCCTGCACAGCTGGGTTGGACTGACAGCTCTCATACTCTACATCCAACAGCTTGTTGTAGGCTTTTTC
GTCTTTCTGCTTCCATGGGCTCCGCCCTCTCTCCGGGCAATCGTCATGCCCATACACGTGTATTCTGGAC
TCCTCCTCTTCGGAACAGTGATTGCGACGGTTCTCATGGGAGTGACAGAAAAGCTGTTCTTTGTCCTGAA
ACACCCCTCGTACCATTCATTCCCACCAGAAGGTGTTTTTACAAATACGCTGGGCCTTCTGATTCTGGTG
TTTGGAGCCCTCATCTTTTGGATTGTCACCAGGCCCCAATGGAAACGCCCTAGAGAACCAGGCTCTGTCC
CTCTCCAGCTAAATGGAGGCAATGCAGAATGCAGAATGGAAGGCGCCATAGCAATAAGCTCCGCCCACAG
TATGGACGCAGCTGACCCAGCTGACGCAGAGTCAAGCAGTGAGGGAGCAGCCCGGAAGAGAACCCTCGGC
CTTGCTGACTCTGGCCAGAGGTCCACCATGTGA

Translation (290 aa):
MAMEGYRGFLGLLVSALLVGFLSVIFVLIWVLHFREGLGWNGSGLEFNWHPVLAVTGFVFIQGIAIIVYR
LPWTWKCSKLLMKSIHAGLNAVAAILAIISVVAVFEYHNVQKVPHMYSLHSWVGLTALILYIQQLVVGFF
VFLLPWAPPSLRAIVMPIHVYSGLLLFGTVIATVLMGVTEKLFFVLKHPSYHSFPPEGVFTNTLGLLILV
FGALIFWIVTRPQWKRPREPGSVPLQLNGGNAECRMEGAIAISSAHSMDAADPADAESSSEGAARKRTLG
LADSGQRSTM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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