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Report for CCDS51767.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51767.1 Public Mus musculus 6 Aoc1 23 108 98 CCDS HistoryNCBI Gene:76507Re-query CCDS DB by CCDS ID:51767.1Re-query CCDS DB by GeneID:76507See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51767.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031835.13 ENSMUSP00000031835.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031835.13Link to Ensembl Protein Viewer:ENSMUSP00000031835.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000031835Re-query CCDS DB by Protein ID:ENSMUSP00000031835
Original member Current member EBI ENSMUST00000162948.6 ENSMUSP00000124085.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000162948.6Link to Ensembl Protein Viewer:ENSMUSP00000124085.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000162948Re-query CCDS DB by Protein ID:ENSMUSP00000124085
Original member Current member EBI ENSMUST00000167529.2 ENSMUSP00000128816.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000167529.2Link to Ensembl Protein Viewer:ENSMUSP00000128816.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000167529Re-query CCDS DB by Protein ID:ENSMUSP00000128816
Original member Current member NCBI NM_001161621.1 NP_001155093.1 Accepted alive Link to Nucleotide Sequence:NM_001161621.1Link to Protein Sequence:NP_001155093.1Re-query CCDS DB by Nucleotide ID:NM_001161621Re-query CCDS DB by Protein ID:NP_001155093Link to BLAST:NP_001155093.1
Original member Current member NCBI NM_001161622.1 NP_001155094.1 Accepted alive Link to Nucleotide Sequence:NM_001161622.1Link to Protein Sequence:NP_001155094.1Re-query CCDS DB by Nucleotide ID:NM_001161622Re-query CCDS DB by Protein ID:NP_001155094Link to BLAST:NP_001155094.1
Original member Current member NCBI NM_029638.2 NP_083914.2 Accepted alive Link to Nucleotide Sequence:NM_029638.2Link to Protein Sequence:NP_083914.2Re-query CCDS DB by Nucleotide ID:NM_029638Re-query CCDS DB by Protein ID:NP_083914Link to BLAST:NP_083914.2

Chromosomal Locations for CCDS 51767.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 48905192 48906776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 48907610 48907895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 48908204 48908336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 48908567 48908833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2271 nt):
ATGAGGCTGGCACAGATGAGTCTGGCCTTCGGCTGGGCAGCTGTCATATTACTTCTACAGACGGCAGACA
CAGCATCTGCTGTGACGACTCCTCATGACAAAGCAAGGATATTTGCAGACCTGAGCCCCCAGGAGATAAA
GGCTGTGCACAGCTTCCTGATGAGCAGAAAGGAGCTGGGGCTGGAGTCATCCAAGAATCTGACTTTGGCC
AAGAACTCCGTGTTTCTCATTGAGATGCTACTGCCAAAAAAGAAGAATGTGCTGAAATTTTTGGATGAAG
GAAGAAAAAGTCCTGTCCGGGAAGCCAGGGCCATCATCTTCTTCGGTGCCCAGGATCACCCCAATGTCAC
TGAGTTTGCTGTGGGGCCCCTGCCACGGCCCTGCTATGTTCAAGCACTGTCCCCCAGGCCAGGGCACCAT
CTGTCCTGGTCATCAAGACCCATCTCCACAGCGGAGTATGACCTCCTCTACCACATGCTGAACAGAGCCA
TCACGCCTCTGCACCAGTTTTTCCTTGACACTACTGGCTTCTCATTCCTAGGCTGCGATGACCGGTTCTT
GACTTTTACGGATGTAGCGCCGCGTGGTGTGGAGTCTGGTCAGCGTAGAAGCTGGCTTATCGTGCAGCGC
TATGTGGAAGGCTACTTCCTGCATCCCACAGGGCTGGAGATCCTTGTAGATCATAGCAGCACAGATGTCC
AGGACTGGAGAGTGGAACAGCTCTGGTATAACGGCAAGTTCTACAACAGCCCAGAGGAACTGGCTCAGAA
ATACGCAGTTGGAGAAGTGGAGGCAGTGGTTCTGGAGGAAGTGGTTCTCGAGGACCCACTGCCGGGTGCC
ACAGAGCAGCCACCACTCTTCTCTTCCTACAAGCCCCGGGGGGAATTCCACACGCCAGTCACTGTTGCAG
GCCCCCACGTTGTCCAGCCCAGTGGCCCCAGATATAAGCTAGAGGGCAACGTTGTGCTCTACGGAGACTG
GAGCTTCTCTTACCGGCTAAGATCCTCTTCTGGGCTGCAGATCTTTAATGTACTCTTTGGAGGTGAGCGT
GTTGCCTATGAGGTCAGCGTGCAGGAGGCTGTGGCACTATATGGAGGACACACACCTGCAGGCATGCAGA
CTAAGTATATTGATGTTGGTTGGGGCCTGGGCAGTGTCACTCACGAGCTGGCCCCTGGTATTGACTGTCC
AGAGACCGCTACTTTCCTGGATGCTTTCCACTATTATGACAGCGATGGCCCTGTCCTTTATCCACGCGCT
CTGTGCCTCTTTGAGATGCCCACAGGGGTACCCCTTAGGCGCCACTTTGACTCAAACTTTAAAGGTGGCT
TCAACTTCTATGCGGGTTTGAAAGGATATGTGCTGGTGCTACGGACGACATCGACAGTCTATAATTATGA
CTATATCTGGGATTTCATCTTCTACCCTAATGGTGTGATGGAGACCAAGATGCATGCCACTGGATATGTC
CACGCAACCTTCTACACCCCTGAGGGACTGCGCCATGGCACTCGCTTACAAACCCACCTGCTTGGCAACA
TCCACACCCACCTGGTGCACTACCGTGTTGACCTGGACGTGGCAGGCACCAAGAACAGCTTCCGGACACT
GAAGACAAAGCTGGAAAACATCACCAATCCCTGGAGCCCAAGTCACTCCCTAGTCCAGCCCACACTTGAG
CAGACCCAGTACTCCCACGAGCACCAGGCTGCATTCCGCTTTGGACAGACTCTGCCCAAGTACCTGCTCT
TTAGCAGCCCCCAAAAGAACCGTTGGGGCCACAGGCGGAGCTACCGCCTGCAGATCCACTCTATGGCTGA
GCAGGTGCTACCACCAGGTTGGCAGGAGGAGCGGGCTGTCACTTGGGCCAGGTATCCCTTGGCTGTGACA
AAGTATCGGGAATCTGAACGCTACAGCAGCAGCCTCTACAACCAGAATGACCCCTGGGATCCCCCTGTGG
TTTTTGAGGAGTTCCTTCGGAACAACGAGAACATTGAAAATGAGGATCTGGTGGCCTGGGTGACAGTAGG
CTTCCTGCACATCCCTCACTCAGAGGATGTCCCCAACACAGCCACACCTGGAAATTGTGTGGGCTTCTTG
ATCCGGCCATTCAACTTCTTCGAGGAGGATCCATCCCTGGCATCTAGAGACACTGTGATAGTGTGGCCCC
AGGACAACGGTCTCAACCATGTTCAGCGCTGGATCCCTGAGAACAGGGACTGCTTGGTGTCTCCTCCTTT
TAGCTACAATGGGACCTACAAGCCTGTGTGA

Translation (756 aa):
MRLAQMSLAFGWAAVILLLQTADTASAVTTPHDKARIFADLSPQEIKAVHSFLMSRKELGLESSKNLTLA
KNSVFLIEMLLPKKKNVLKFLDEGRKSPVREARAIIFFGAQDHPNVTEFAVGPLPRPCYVQALSPRPGHH
LSWSSRPISTAEYDLLYHMLNRAITPLHQFFLDTTGFSFLGCDDRFLTFTDVAPRGVESGQRRSWLIVQR
YVEGYFLHPTGLEILVDHSSTDVQDWRVEQLWYNGKFYNSPEELAQKYAVGEVEAVVLEEVVLEDPLPGA
TEQPPLFSSYKPRGEFHTPVTVAGPHVVQPSGPRYKLEGNVVLYGDWSFSYRLRSSSGLQIFNVLFGGER
VAYEVSVQEAVALYGGHTPAGMQTKYIDVGWGLGSVTHELAPGIDCPETATFLDAFHYYDSDGPVLYPRA
LCLFEMPTGVPLRRHFDSNFKGGFNFYAGLKGYVLVLRTTSTVYNYDYIWDFIFYPNGVMETKMHATGYV
HATFYTPEGLRHGTRLQTHLLGNIHTHLVHYRVDLDVAGTKNSFRTLKTKLENITNPWSPSHSLVQPTLE
QTQYSHEHQAAFRFGQTLPKYLLFSSPQKNRWGHRRSYRLQIHSMAEQVLPPGWQEERAVTWARYPLAVT
KYRESERYSSSLYNQNDPWDPPVVFEEFLRNNENIENEDLVAWVTVGFLHIPHSEDVPNTATPGNCVGFL
IRPFNFFEEDPSLASRDTVIVWPQDNGLNHVQRWIPENRDCLVSPPFSYNGTYKPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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