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Report for CCDS53654.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53654.1 Public Homo sapiens 11 PLCB3 24 110 108 CCDS HistoryNCBI Gene:5331Re-query CCDS DB by CCDS ID:53654.1Re-query CCDS DB by GeneID:5331See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53654.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325234.5 ENSP00000324660.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000325234.5Link to Ensembl Protein Viewer:ENSP00000324660.5Re-query CCDS DB by Nucleotide ID:ENST00000325234Re-query CCDS DB by Protein ID:ENSP00000324660
Original member Current member NCBI NM_001184883.2 NP_001171812.1 Accepted alive Link to Nucleotide Sequence:NM_001184883.2Link to Protein Sequence:NP_001171812.1Re-query CCDS DB by Nucleotide ID:NM_001184883Re-query CCDS DB by Protein ID:NP_001171812Link to BLAST:NP_001171812.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171812.1 1167 Q01970-2 1167 100% 0 0

Chromosomal Locations for CCDS 53654.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 64251650 64251748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64254952 64255038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64255234 64255313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64255396 64255449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64255541 64255616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64255721 64255821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64256376 64256542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64256618 64256764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64258473 64258713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64258885 64258969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64259058 64259244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64260029 64260234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64261400 64261496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64261581 64261665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64261952 64262076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64262407 64262561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64262647 64262808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64263498 64263597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64263691 64263795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64264021 64264112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64264951 64265104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64265192 64265227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64265310 64265502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64265886 64266039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64266126 64266202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64266315 64266404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64266495 64266552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64267185 64267271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64267353 64267556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3504 nt):
ATGGCGGGCGCCCAGCCCGGCGTCCACGCGCTGCAGTTGGAGCCGCCCACCGTGGTGGAGACCCTGCGGC
GCGGGAGTAAGTTCATCAAATGGGACGAGGAGAAGCTGATGACGGTGGTGTCTGGGCCAGACCCAGTGAA
CACAGTGTTCTTGAACTTCATGGCCGTGCAGGATGACACAGCCAAGGTCTGGTCTGAGGAGCTATTCAAG
CTGGCTATGAACATCCTGGCTCAGAACGCCTCCCGGAACACCTTCCTGCGCAAAGCATACACGAAGCTGA
AGCTGCAGGTGAACCAGGATGGTCGGATCCCCGTCAAGAACATCCTGAAGATGTTCTCAGCAGACAAGAA
GCGGGTGGAGACTGCGCTGGAATCCTGTGGCCTCAAATTCAACCGGAGTGAGTCCATCCGGCCTGATGAG
TTTTCCTTGGAAATCTTTGAGCGGTTCCTGAACAAGCTGTGTCTGCGGCCGGACATTGACAAGATCCTGC
TGGAGATAGGCGCCAAGGGCAAGCCATACCTGACGCTGGAGCAGCTCATGGACTTCATCAACCAGAAGCA
ACGCGACCCGAGACTCAACGAAGTGCTGTACCCGCCCCTGCGGCCCTCCCAGGCCCGGCTGCTCATCGAA
AAGTATGAGCCCAACCAGCAGTTTCTGGAGCGAGACCAGATGTCCATGGAGGGCTTTAGCCGCTACCTGG
GAGGCGAGGAGAATGGCATCCTGCCCCTGGAAGCCCTGGATCTGAGCACGGACATGACCCAGCCACTGAG
TGCCTACTTCATCAACTCCTCGCATAACACCTATCTCACTGCGGGGCAGCTGGCTGGGACCTCGTCGGTG
GAGATGTACCGCCAGGCACTACTATGGGGCTGCCGCTGCGTGGAGCTGGACGTGTGGAAGGGACGGCCGC
CTGAGGAGGAACCCTTCATTACCCACGGCTTCACCATGACCACAGAGGTGCCTCTGCGCGACGTGCTGGA
GGCCATTGCCGAGACTGCCTTCAAGACCTCGCCCTACCCCGTCATCCTCTCCTTCGAGAACCATGTGGAC
TCGGCAAAGCAACAGGCAAAGATGGCTGAGTACTGCCGCTCCATCTTTGGAGACGCGCTACTCATCGAGC
CTCTGGACAAGTACCCGCTGGCCCCAGGCGTTCCCCTGCCCAGCCCCCAGGACCTGATGGGCCGTATCCT
GGTGAAGAACAAGAAGCGGCACCGACCCAGCGCAGGTGGCCCAGACAGCGCCGGGCGCAAGCGGCCCCTG
GAGCAGAGCAATTCTGCCCTGAGCGAGAGCTCCGCGGCCACCGAGCCCTCCTCCCCGCAGCTGGGGTCTC
CCAGCTCTGACAGCTGCCCAGGCCTGAGCAATGGGGAGGAGGTAGGGCTTGAGAAGCCCAGCCTGGAGCC
TCAGAAGTCTCTGGGTGACGAGGGCCTGAACCGAGGCCCCTATGTTCTTGGACCTGCTGACCGTGAGGAT
GAGGAGGAAGATGAGGAAGAGGAGGAACAGACAGACCCCAAAAAGCCAACTACAGATGAGGGCACAGCCA
GCAGCGAGGTGAATGCCACTGAGGAGATGTCCACGCTTGTCAACTACATCGAACCTGTCAAGTTCAAGTC
CTTTGAGGCTGCTCGAAAGAGGAACAAATGCTTCGAGATGTCGTCCTTTGTGGAGACCAAGGCCATGGAG
CAACTGACCAAGAGCCCCATGGAGTTTGTGGAATACAACAAGCAGCAGCTCAGCCGCATCTACCCCAAGG
GCACCCGCGTGGACTCCTCCAACTACATGCCCCAGCTCTTCTGGAACGTAGGGTGCCAGCTTGTTGCGCT
CAACTTCCAGACCCTCGATGTGGCGATGCAGCTCAACGCGGGCGTTTTTGAGTACAACGGGCGCAGCGGG
TACCTGCTCAAGCCGGAGTTCATGCGGCGGCCGGACAAGTCCTTCGACCCCTTCACTGAGGTCATCGTGG
ATGGCATCGTGGCCAATGCCTTGCGGGTCAAGGTGATCTCAGGGCAGTTCCTGTCCGACAGGAAGGTGGG
CATCTACGTGGAGGTGGACATGTTTGGCCTCCCTGTTGATACGCGGCGCAAGTACCGCACCCGGACCTCT
CAGGGGAACTCGTTCAACCCCGTGTGGGACGAAGAGCCCTTCGACTTCCCCAAGGTGGTGCTGCCCACGC
TGGCTTCACTTCGCATTGCAGCCTTTGAGGAGGGGGGTAAATTCGTAGGGCACCGGATCCTGCCTGTCTC
TGCCATCCGCTCCGGATACCACTACGTCTGCCTGCGGAACGAGGCCAACCAACCGCTGTGCCTGCCGGCC
CTGCTCATCTACACCGAAGCCTCGGACTACATTCCTGACGACCACCAGGACTATGCGGAGGCCCTGATCA
ACCCCATTAAGCACGTCAGCCTGATGGACCAGAGGGCCCGGCAGCTGGCCGCCCTCATTGGGGAGAGTGA
GGCTCAGGCTGGCCAAGAGACGTGCCAGGACACCCAGTCTCAGCAGCTGGGGTCTCAGCCGTCCTCAAAC
CCCACCCCCAGCCCACTGGATGCCTCCCCCCGCCGGCCCCCTGGCCCCACCACCTCCCCTGCCAGCACCT
CCCTCAGCAGCCCAGGGCAGCGTGATGATCTCATCGCCAGCATCCTCTCAGAGGTGGCCCCCACCCCGCT
GGATGAGCTCCGAGGTCACAAGGCTCTGGTCAAGCTCCGGAGCCGGCAAGAGCGAGACCTGCGGGAGCTG
CGCAAGAAGCATCAGCGGAAGGCAGTCACCCTCACCCGCCGCCTGCTGGATGGCCTGGCTCAGGCACAGG
CTGAGGGCAGGTGCCGGCTGCGGCCAGGTGCCCTAGGTGGGGCCGCTGATGTGGAGGACACGAAGGAGGG
GGAGGACGAGGCAAAGCGGTATCAGGAGTTCCAGAACAGACAGGTGCAGAGCCTGCTGGAGCTGCGGGAG
GCCCAGGTGGACGCAGAGGCCCAGCGGAGGCTGGAACACCTGAGACAGGCTCTGCAGCGGCTCAGGGAGG
TCGTCCTTGATGCAAACACAACTCAGTTCAAGAGGCTGAAAGAGATGAACGAGAGGGAGAAGAAGGAGCT
GCAGAAGATCCTGGACAGAAAGCGCCATAACAGCATCTCGGAGGCCAAGATGAGGGACAAGCATAAGAAG
GAGGCGGAACTGACGGAGATTAACCGTCGGCACATCACTGAGTCAGTCAACTCCATCCGTCGGCTGGAGG
AGGCCCAGAAGCAGCGGCATGACCGTCTTGTGGCTGGGCAGCAGCAGGTCCTGCAACAGCTGGCAGAAGA
GGAGCCCAAGCTGCTGGCCCAGCTGGCCCAGGAGTGTCAGGAGCAGCGGGCGAGGCTCCCCCAGGAGATC
CGCCGGAGCCTGCTGGGCGAGATGCCGGAGGGGCTGGGGGACGGGCCTCTGGTGGCCTGTGCCAGCAACG
GTCACGCACCCGGGAGCAGCGGGCACCTGTCGGGCGCTGACTCGGAGAGCCAGGAGGAGAACACGCAGCT
CTGA

Translation (1167 aa):
MAGAQPGVHALQLEPPTVVETLRRGSKFIKWDEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFK
LAMNILAQNASRNTFLRKAYTKLKLQVNQDGRIPVKNILKMFSADKKRVETALESCGLKFNRSESIRPDE
FSLEIFERFLNKLCLRPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIE
KYEPNQQFLERDQMSMEGFSRYLGGEENGILPLEALDLSTDMTQPLSAYFINSSHNTYLTAGQLAGTSSV
EMYRQALLWGCRCVELDVWKGRPPEEEPFITHGFTMTTEVPLRDVLEAIAETAFKTSPYPVILSFENHVD
SAKQQAKMAEYCRSIFGDALLIEPLDKYPLAPGVPLPSPQDLMGRILVKNKKRHRPSAGGPDSAGRKRPL
EQSNSALSESSAATEPSSPQLGSPSSDSCPGLSNGEEVGLEKPSLEPQKSLGDEGLNRGPYVLGPADRED
EEEDEEEEEQTDPKKPTTDEGTASSEVNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSSFVETKAME
QLTKSPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNGRSG
YLLKPEFMRRPDKSFDPFTEVIVDGIVANALRVKVISGQFLSDRKVGIYVEVDMFGLPVDTRRKYRTRTS
QGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEGGKFVGHRILPVSAIRSGYHYVCLRNEANQPLCLPA
LLIYTEASDYIPDDHQDYAEALINPIKHVSLMDQRARQLAALIGESEAQAGQETCQDTQSQQLGSQPSSN
PTPSPLDASPRRPPGPTTSPASTSLSSPGQRDDLIASILSEVAPTPLDELRGHKALVKLRSRQERDLREL
RKKHQRKAVTLTRRLLDGLAQAQAEGRCRLRPGALGGAADVEDTKEGEDEAKRYQEFQNRQVQSLLELRE
AQVDAEAQRRLEHLRQALQRLREVVLDANTTQFKRLKEMNEREKKELQKILDRKRHNSISEAKMRDKHKK
EAELTEINRRHITESVNSIRRLEEAQKQRHDRLVAGQQQVLQQLAEEEPKLLAQLAQECQEQRARLPQEI
RRSLLGEMPEGLGDGPLVACASNGHAPGSSGHLSGADSESQEENTQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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