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Report for CCDS53681.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53681.1 Public Homo sapiens 11 B3GNT6 24 110 108 CCDS HistoryNCBI Gene:192134Re-query CCDS DB by CCDS ID:53681.1Re-query CCDS DB by GeneID:192134See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53681.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000622824.1 ENSP00000484640.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000622824.1Link to Ensembl Protein Viewer:ENSP00000484640.1Re-query CCDS DB by Nucleotide ID:ENST00000622824Re-query CCDS DB by Protein ID:ENSP00000484640
Original member Current member NCBI NM_138706.5 NP_619651.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138706.5Link to Protein Sequence:NP_619651.3Re-query CCDS DB by Nucleotide ID:NM_138706Re-query CCDS DB by Protein ID:NP_619651Link to BLAST:NP_619651.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_619651.3 384 Q6ZMB0-1 384 100% 0 0

Chromosomal Locations for CCDS 53681.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 77039552 77040706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1155 nt):
ATGGCTTTTCCCTGCCGCAGGTCCCTGACTGCCAAGACTCTGGCCTGCCTCCTGGTGGGCGTGAGTTTCT
TAGCACTGCAGCAGTGGTTCCTCCAGGCGCCAAGGTCCCCGCGGGAGGAGAGGTCCCCGCAGGAGGAGAC
GCCAGAGGGTCCCACCGACGCTCCCGCGGCTGACGAGCCGCCCTCGGAGCTCGTCCCCGGGCCCCCGTGC
GTGGCGAACGCCTCGGCGAACGCCACGGCCGACTTCGAGCAGCTGCCCGCGCGCATCCAGGACTTCCTGC
GGTACCGCCACTGCCGCCACTTCCCGCTGCTTTGGGACGCACCGGCCAAGTGCGCCGGCGGCCGAGGCGT
GTTCCTGCTCCTGGCGGTGAAGTCGGCGCCTGAGCACTACGAGCGACGCGAGCTCATCCGGCGCACGTGG
GGGCAAGAGCGCAGCTACGGCGGGCGGCCAGTGCGCCGCCTCTTTCTATTGGGCACCCCGGGCCCCGAGG
ACGAGGCGCGCGCGGAGCGGCTGGCGGAGCTGGTGGCGCTGGAGGCGCGCGAGCACGGCGACGTGCTGCA
GTGGGCCTTCGCGGACACCTTCCTCAACCTCACGCTCAAGCACCTGCACTTGCTCGACTGGCTGGCTGCA
CGCTGCCCGCACGCGCGCTTTCTGCTCAGCGGCGACGACGACGTGTTCGTGCACACCGCCAACGTAGTCC
GCTTCCTGCAGGCGCAGCCACCCGGCCGCCACCTGTTCTCCGGCCAGCTCATGGAGGGCTCCGTGCCCAT
CCGCGACAGCTGGAGCAAGTACTTCGTGCCGCCGCAGCTCTTCCCCGGGTCCGCTTACCCGGTGTACTGC
AGCGGCGGCGGCTTCCTCCTGTCCGGCCCCACGGCCCGGGCCCTGCGCGCGGCCGCCCGCCACACCCCGC
TCTTCCCCATCGACGACGCCTACATGGGCATGTGTCTGGAGCGCGCCGGCCTGGCGCCCAGCGGCCACGA
GGGCATCCGACCCTTCGGCGTGCAGCTGCCTGGCGCACAGCAGTCCTCCTTCGACCCCTGCATGTACCGC
GAGTTGCTGCTAGTGCACCGCTTCGCGCCCTACGAGATGCTGCTCATGTGGAAGGCGCTGCACAGCCCCG
CGCTCAGCTGTGACCGGGGACACCGGGTCTCCTGA

Translation (384 aa):
MAFPCRRSLTAKTLACLLVGVSFLALQQWFLQAPRSPREERSPQEETPEGPTDAPAADEPPSELVPGPPC
VANASANATADFEQLPARIQDFLRYRHCRHFPLLWDAPAKCAGGRGVFLLLAVKSAPEHYERRELIRRTW
GQERSYGGRPVRRLFLLGTPGPEDEARAERLAELVALEAREHGDVLQWAFADTFLNLTLKHLHLLDWLAA
RCPHARFLLSGDDDVFVHTANVVRFLQAQPPGRHLFSGQLMEGSVPIRDSWSKYFVPPQLFPGSAYPVYC
SGGGFLLSGPTARALRAAARHTPLFPIDDAYMGMCLERAGLAPSGHEGIRPFGVQLPGAQQSSFDPCMYR
ELLLVHRFAPYEMLLMWKALHSPALSCDRGHRVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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