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Report for CCDS54023.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54023.1 Public Homo sapiens 16 CES3 24 110 108 CCDS HistoryNCBI Gene:23491Re-query CCDS DB by CCDS ID:54023.1Re-query CCDS DB by GeneID:23491See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54023.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000543856.1 ENSP00000445559.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000543856.1Link to Ensembl Protein Viewer:ENSP00000445559.1Re-query CCDS DB by Nucleotide ID:ENST00000543856Re-query CCDS DB by Protein ID:ENSP00000445559
Original member Current member NCBI NM_001185176.2 NP_001172105.1 Accepted alive Link to Nucleotide Sequence:NM_001185176.2Link to Protein Sequence:NP_001172105.1Re-query CCDS DB by Nucleotide ID:NM_001185176Re-query CCDS DB by Protein ID:NP_001172105Link to BLAST:NP_001172105.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001172105.1 210 Q6UWW8-2 210 100% 0 0

Chromosomal Locations for CCDS 54023.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 66969700 66969759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66971172 66971319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66972356 66972505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66972668 66972746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66972854 66973049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (633 nt):
ATGGAGCAGATGAGCCGGGAGGACATGCTGGCCATCTCAACACCCGTCTTGACCAGTCTGGATGTGCCCC
CTGAGATGATGCCCACCGTCATAGATGAATACCTAGGAAGCAACTCGGACGCACAAGCCAAATGCCAGGC
GTTCCAGGAATTCATGGGTGACGTATTCATCAATGTTCCCACCGTCAGTTTTTCAAGATACCTTCGAGAT
TCTGGAAGCCCTGTCTTTTTCTATGAGTTCCAGCATCGACCCAGTTCTTTTGCGAAGATCAAACCTGCCT
GGGTGAAGGCTGATCATGGGGCCGAGGGTGCTTTTGTGTTCGGAGGTCCCTTCCTCATGGACGAGAGCTC
CCGCCTGGCCTTTCCAGAGGCCACAGAGGAGGAGAAGCAGCTAAGCCTCACCATGATGGCCCAGTGGACC
CACTTTGCCCGGACAGGGGACCCCAATAGCAAGGCTCTGCCTCCTTGGCCCCAATTCAACCAGGCGGAAC
AATATCTGGAGATCAACCCAGTGCCACGGGCCGGACAGAAGTTCAGGGAGGCCTGGATGCAGTTCTGGTC
AGAGACGCTCCCCAGCAAGATACAACAGTGGCACCAGAAGCAGAAGAACAGGAAGGCCCAGGAGGACCTC
TGA

Translation (210 aa):
MEQMSREDMLAISTPVLTSLDVPPEMMPTVIDEYLGSNSDAQAKCQAFQEFMGDVFINVPTVSFSRYLRD
SGSPVFFYEFQHRPSSFAKIKPAWVKADHGAEGAFVFGGPFLMDESSRLAFPEATEEEKQLSLTMMAQWT
HFARTGDPNSKALPPWPQFNQAEQYLEINPVPRAGQKFREAWMQFWSETLPSKIQQWHQKQKNRKAQEDL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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