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Report for CCDS54190.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54190.1 Public Homo sapiens 18 CNDP2 24 110 108 CCDS HistoryNCBI Gene:55748Re-query CCDS DB by CCDS ID:54190.1Re-query CCDS DB by GeneID:55748See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54190.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324301.12 ENSP00000325756.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000324301.12Link to Ensembl Protein Viewer:ENSP00000325756.8Re-query CCDS DB by Nucleotide ID:ENST00000324301Re-query CCDS DB by Protein ID:ENSP00000325756
Original member Current member NCBI NM_001168499.2 NP_001161971.1 Accepted alive Link to Nucleotide Sequence:NM_001168499.2Link to Protein Sequence:NP_001161971.1Re-query CCDS DB by Nucleotide ID:NM_001168499Re-query CCDS DB by Protein ID:NP_001161971Link to BLAST:NP_001161971.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161971.1 391 Q96KP4-2 391 100% 0 0

Chromosomal Locations for CCDS 54190.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 74499974 74500033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74501329 74501472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74510813 74511013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74512448 74512532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74513559 74513719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74516228 74516392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74518499 74518640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74518949 74519096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74519999 74520068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1176 nt):
ATGGCGGCCCTCACTACCCTGTTTAAGTACATAGATGAAAATCAGGATCGCTACATTAAGAAACTCGCAA
AATGGGTGGCTATCCAGAGTGTGTCTGCGTGGCCGGAGAAGAGAGGCGAAATCAGGAGGATGATGGAAGT
TGCTGCTGCAGATGTTAAGCAGTTGGGGGGCTCTGTGGAACTGGTGGATATCGGAAAACAAAAGGAGATT
CCTGTCAACGTCCGATTCTGCCTCGAAGGCATGGAGGAGTCAGGCTCTGAGGGCCTAGACGAGCTGATTT
TTGCCCGGAAAGACACATTCTTTAAGGATGTGGACTATGTCTGCATTTCTGACAATTACTGGCTGGGAAA
GAAGAAGCCCTGCATCACCTACGGCCTCAGGGGCATTTGCTACTTTTTCATCGAGGTGGAGTGCAGCAAC
AAAGACCTCCATTCTGGGGTGTACGGGGGCTCGGTGCATGAGGCCATGACTGATCTCATTTTGCTGATGG
GCTCTTTGGTGGACAAGAGGGGGAACATCCTGATCCCCGGCATTAACGAGGCCGTGGCCGCCGTCACGGA
AGAGGAGCACAAGCTGTACGACGACATCGACTTTGACATAGAGGAGTTTGCCAAGGATGTGGGGGCGCAG
ATCCTCCTGCACAGCCACAAGAAAGACATCCTCATGCACCGATGGCGGTACCCGTCTCTGTCCCTCCATG
GCATCGAAGGCGCCTTCTCTGGGTCTGGGGCCAAGACCGTGATTCCCAGGAAGGTGGTTGGCAAGTTCTC
CATCAGGCTCGTGCCGAACATGACTCCTGAAGTCGTCGGCGAGCAGGTCACAAGCTACCTAACTAAGAAG
TTTGCTGAACTACGCAGCCCCAATGAGTTCAAGGTGTACATGGGCCACGGTGGGAAGCCCTGGGTCTCCG
ACTTCAGTCACCCTCATTACCTGGCTGGGAGAAGAGCCATGAAGACAGTTTTTGGTGTTGAGCCAGACTT
GACCAGGGAAGGCGGCAGTATTCCCGTGACCTTGACCTTTCAGGAGGCCACGGGCAAGAACGTCATGCTG
CTGCCTGTGGGGTCAGCGGATGACGGAGCCCACTCCCAGAATGAAAAGCTCAACAGGTATAACTACATAG
AGGGAACCAAGATGCTGGCCGCGTACCTGTATGAGGTCTCCCAGCTGAAGGACTAG

Translation (391 aa):
MAALTTLFKYIDENQDRYIKKLAKWVAIQSVSAWPEKRGEIRRMMEVAAADVKQLGGSVELVDIGKQKEI
PVNVRFCLEGMEESGSEGLDELIFARKDTFFKDVDYVCISDNYWLGKKKPCITYGLRGICYFFIEVECSN
KDLHSGVYGGSVHEAMTDLILLMGSLVDKRGNILIPGINEAVAAVTEEEHKLYDDIDFDIEEFAKDVGAQ
ILLHSHKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQVTSYLTKK
FAELRSPNEFKVYMGHGGKPWVSDFSHPHYLAGRRAMKTVFGVEPDLTREGGSIPVTLTFQEATGKNVML
LPVGSADDGAHSQNEKLNRYNYIEGTKMLAAYLYEVSQLKD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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