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Report for CCDS54580.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54580.1 Public Homo sapiens 3 IP6K2 24 110 108 CCDS HistoryNCBI Gene:51447Re-query CCDS DB by CCDS ID:54580.1Re-query CCDS DB by GeneID:51447See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54580.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000431721.6 ENSP00000414139.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000431721.6Link to Ensembl Protein Viewer:ENSP00000414139.2Re-query CCDS DB by Nucleotide ID:ENST00000431721Re-query CCDS DB by Protein ID:ENSP00000414139
Original member Current member NCBI NM_001190316.2 NP_001177245.1 Accepted alive Link to Nucleotide Sequence:NM_001190316.2Link to Protein Sequence:NP_001177245.1Re-query CCDS DB by Nucleotide ID:NM_001190316Re-query CCDS DB by Protein ID:NP_001177245Link to BLAST:NP_001177245.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177245.1 185 Q9UHH9-4 185 100% 0 0

Chromosomal Locations for CCDS 54580.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 48694899 48695421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48715315 48715349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (558 nt):
ATGAGCCTGAACCTCCCTGAGGCCAGCTTACTGAGCAGAGCATCCTGGCCAGAACAAGCCAAGGAGCCAA
GACGAGAGGGACACACGGACAAACAACAGACAGAAGACGTACTGGCCGCTGGACTCCGCTGCCTCCCCCA
TCTCCCCGCCATCTGCGCCCGGAGGATGAGCCCAGCCTTCAGGGCCATGGATGTGGAGCCCCGCGCCAAA
GGCGTCCTTCTGGAGCCCTTTGTCCACCAGGTCGGGGGGCACTCATGCGTGCTCCGCTTCAATGAGACAA
CCCTGTGCAAGCCCCTGGTCCCAAGGGAACATCAGTTCTACGAGACCCTCCCTGCTGAGATGCGCAAATT
CACTCCCCAGTACAAAGGTAAGTCCCAGCTGCTGGAGGGGTTGCCACACTGGCGAGGAGATGTGAGAGAT
CGTGGCCATGGAAGGCCCTGGCAGCCATCCCTGGAGCCCTCACTCCCTCCCACTCTGTGCTTTCCCTCCC
TCTCCTCCTTCTCCTCCTCCTGGCCCTCAGCCCAGCATCTCACACCCTCAGTTTTCAATCCCTGGTAA

Translation (185 aa):
MSLNLPEASLLSRASWPEQAKEPRREGHTDKQQTEDVLAAGLRCLPHLPAICARRMSPAFRAMDVEPRAK
GVLLEPFVHQVGGHSCVLRFNETTLCKPLVPREHQFYETLPAEMRKFTPQYKGKSQLLEGLPHWRGDVRD
RGHGRPWQPSLEPSLPPTLCFPSLSSFSSSWPSAQHLTPSVFNPW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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