CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS54619.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
54619.1 |
Reviewed, withdrawal pending |
Homo sapiens |
3 |
PLCXD2 |
24 |
110 |
108 |
|
Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62
Review status: Reviewed (by CCDS collaboration) Sequence IDs included in CCDS 54619.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000477665.2 |
ENSP00000420686.1 |
MANE Select |
Accepted |
alive |
|
|
|
NCBI |
NM_001185106.1 |
NP_001172035.1 |
MANE Select |
Removed |
not alive |
|
Chromosomal Locations for CCDS 54619.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (918 nt): ATGCTAGCAGTTAGGAAGGCCAGGAGGAAACTCAGGATGGGGACCATCTGCTCCCCCAACCCCAGCGGGA CAAAGACATCATCGGAGGTCTGCAATGCCGACTGGATGGCCTCGCTCCCCCCTCACCTCCACAACCTCCC CCTTTCCAATCTGGCAATCCCAGGCTCACATGATTCATTCAGCTACTGGGTGGATGAAAAGTCCCCAGTG GGGCCTGACCAAACCCAAGCTATCAAACGCCTCGCCAGGATCTCCTTGGTGAAGAAGCTAATGAAGAAGT GGTCTGTGACTCAGAACCTGACATTTCGAGAACAGCTGGAAGCTGGGATCCGCTACTTTGACCTGCGTGT GTCTTCCAAACCAGGGGATGCCGACCAGGAGATCTACTTCATCCATGGGCTTTTTGGCATCAAGGTCTGG GATGGGCTGATGGAAATTGACTCGTTTCTTACACAGCACCCCCAGGAGATTATCTTCCTGGATTTCAACC ACTTCTATGCCATGGATGAGACCCATCACAAATGCCTGGTTCTGCGGATCCAGGAGGCCTTTGGAAACAA GCTGTGCCCAGCCTGCAGTGTGGAAAGTTTGACGCTGCGAACTCTGTGGGAGAAGAACTGCCAGGTTCTT ATTTTCTACCACTGTCCCTTCTACAAGCAGTACCCCTTCCTGTGGCCAGGAAAGAAGATTCCAGCGCCCT GGGCAAACACCACAAGTGTGCGCAAACTAATCCTCTTCTTGGAGACCACTCTGAGTGAGCGGGCCTCACG GGGCTCCTTCCATGTCTCCCAAGCGATCCTCACCCCCAGAGTGAAGACCATTGCCCGGGGCTTGGTTGGG GGCCTCAAGAACACGCTGGTTCATAGCAATCGCTGGAACAGCCATGGGCCATCCCTGCTGAGTCAGGAAA GAAGCTGA
Translation (305 aa): MLAVRKARRKLRMGTICSPNPSGTKTSSEVCNADWMASLPPHLHNLPLSNLAIPGSHDSFSYWVDEKSPV GPDQTQAIKRLARISLVKKLMKKWSVTQNLTFREQLEAGIRYFDLRVSSKPGDADQEIYFIHGLFGIKVW DGLMEIDSFLTQHPQEIIFLDFNHFYAMDETHHKCLVLRIQEAFGNKLCPACSVESLTLRTLWEKNCQVL IFYHCPFYKQYPFLWPGKKIPAPWANTTSVRKLILFLETTLSERASRGSFHVSQAILTPRVKTIARGLVG GLKNTLVHSNRWNSHGPSLLSQERS
|