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Report for CCDS55134.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55134.1 Public Homo sapiens 7 CYP3A5 24 110 108 CCDS HistoryNCBI Gene:1577Re-query CCDS DB by CCDS ID:55134.1Re-query CCDS DB by GeneID:1577See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55134.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000439761.3 ENSP00000401269.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000439761.3Link to Ensembl Protein Viewer:ENSP00000401269.1Re-query CCDS DB by Nucleotide ID:ENST00000439761Re-query CCDS DB by Protein ID:ENSP00000401269
Original member Current member EBI ENST00000646887.1 ENSP00000496704.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000646887.1Link to Ensembl Protein Viewer:ENSP00000496704.1Re-query CCDS DB by Nucleotide ID:ENST00000646887Re-query CCDS DB by Protein ID:ENSP00000496704
Original member Current member NCBI NM_001190484.3 NP_001177413.1 Accepted alive Link to Nucleotide Sequence:NM_001190484.3Link to Protein Sequence:NP_001177413.1Re-query CCDS DB by Nucleotide ID:NM_001190484Re-query CCDS DB by Protein ID:NP_001177413Link to BLAST:NP_001177413.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177413.1 140 P20815-2 140 100% 0 0

Chromosomal Locations for CCDS 55134.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 99671774 99671878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99672580 99672679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99674533 99674585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99676115 99676208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99679826 99679896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (423 nt):
ATGGACCTCATCCCAAATTTGGCGGTGGAAACCTGGCTTCTCCTGGCTGTCAGCCTGGTGCTCCTCTATC
TATATGGGACCCGTACACATGGACTTTTTAAGAGACTGGGAATTCCAGGGCCCACACCTCTGCCTTTGTT
GGGAAATGTTTTGTCCTATCGTCAGGGTCTCTGGAAATTTGACACAGAGTGCTATAAAAAGTATGGAAAA
ATGTGGGGAACGTATGAAGGTCAACTCCCTGTGCTGGCCATCACAGATCCCGACGTGATCAGAACAGTGC
TAGTGAAAGAATGTTATTCTGTCTTCACAAATCGAAGGATTTGTGCAACGACCAGCACCATCAAGATGCA
GACCCATTCCGTCACCATGTGGCTCCCTCCTGCTGTCCTACAGTCACAACATGGAGTTTGTCTTTTTCTC
TGA

Translation (140 aa):
MDLIPNLAVETWLLLAVSLVLLYLYGTRTHGLFKRLGIPGPTPLPLLGNVLSYRQGLWKFDTECYKKYGK
MWGTYEGQLPVLAITDPDVIRTVLVKECYSVFTNRRICATTSTIKMQTHSVTMWLPPAVLQSQHGVCLFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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