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Report for CCDS56223.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56223.1 Public Homo sapiens 22 PRODH 24 110 108 CCDS HistoryNCBI Gene:5625Re-query CCDS DB by CCDS ID:56223.1Re-query CCDS DB by GeneID:5625See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56223.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334029.6 ENSP00000334726.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000334029.6Link to Ensembl Protein Viewer:ENSP00000334726.2Re-query CCDS DB by Nucleotide ID:ENST00000334029Re-query CCDS DB by Protein ID:ENSP00000334726
Original member Current member EBI ENST00000420436.5 ENSP00000410805.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000420436.5Link to Ensembl Protein Viewer:ENSP00000410805.1Re-query CCDS DB by Nucleotide ID:ENST00000420436Re-query CCDS DB by Protein ID:ENSP00000410805
Original member Current member NCBI NM_001195226.2 NP_001182155.2 Accepted alive Link to Nucleotide Sequence:NM_001195226.2Link to Protein Sequence:NP_001182155.2Re-query CCDS DB by Nucleotide ID:NM_001195226Re-query CCDS DB by Protein ID:NP_001182155Link to BLAST:NP_001182155.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001182155.2 492 O43272-2 492 99.5935% 0 2

Chromosomal Locations for CCDS 56223.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 18913175 18913362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18913438 18913526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18916890 18916988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18918316 18918491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18919451 18919597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18919706 18919798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18921342 18921423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18922325 18922404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18922817 18922933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18923115 18923179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18925051 18925200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18925688 18925722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18930990 18931147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1479 nt):
ATGAAGATGACCTTCTATGGGCATTTTGTAGCCGGGGAGGACCAGGAGTCCATCCAGCCCCTGCTTCGGC
ACTACAGGGCCTTCGGTGTCAGCGCCATCCTGGACTATGGAGTGGAGGAGGACCTGAGCCCCGAGGAGGC
AGAGCACAAGGAGATGGAGTCCTGCACCTCAGCTGCGGAGAGGGATGGCAGTGGCACGAATAAGCGGGAC
AAGCAATACCAGGCCCACTGGGCCTTCGGGGACCGCAGGAATGGTGTCATCAGTGCCCGCACCTACTTCT
ACGCCAATGAGGCCAAGTGCGACAGCCACATGGAGACATTCTTGCGCTGCATCGAAGCCTCAGGTAGAGT
CAGCGATGACGGCTTCATAGCCATTAAGCTCACAGCACTGGGGAGACCCCAGTTTCTGCTGCAGTTCTCA
GAGGTGCTGGCCAAGTGGAGGTGCTTCTTTCACCAAATGGCTGTGGAGCAAGGGCAGGCGGGCCTGGCTG
CCATGGACACCAAGCTGGAGGTGGCGGTGCTGCAGGAAAGTGTCGCAAAGTTGGGCATCGCATCCAGGGC
TGAGATTGAGGACTGGTTCACGGCAGAGACCCTGGGAGTGTCTGGCACCATGGACCTGCTGGACTGGAGC
AGCCTCATCGACAGCAGGACCAAGCTGTCCAAGCACTTGGTAGTCCCCAACGCACAGACAGGACAGCTGG
AGCCCCTGCTGTCCCGGTTCACTGAGGAGGAGGAGCTACAGATGACCAGGATGCTACAGCGGATGGATGT
CCTGGCCAAGAAAGCCACAGAGATGGGCGTGCGGCTGATGGTGGATGCCGAGCAGACCTACTTCCAGCCG
GCCATCAGCCGCCTGACGCTGGAGATGCAGCGGAAGTTCAATGTGGAGAAGCCGCTCATCTTCAACACAT
ACCAGTGCTACCTCAAGGATGCCTATGACAATGTGACCCTGGACGTGGAGCTGGCTCGCCGTGAGGGCTG
GTGTTTTGGGGCCAAGCTGGTGCGGGGCGCATACCTGGCCCAGGAGCGAGCCCGTGCGGCAGAGATCGGC
TATGAGGACCCCATCAACCCCACGTACGAGGCCACCAACGCCATGTACCACAGGTGCCTGGACTACGTGT
TGGAGGAGCTGAAGCACAACGCCAAGGCCAAGGTGATGGTGGCCTCCCACAATGAGGACACAGTGCGCTT
TGCACTGCGCAGGATGGAGGAGCTGGGCCTGCATCCTGCTGACCACCGGGTGTACTTTGGACAGCTGCTA
GGCATGTGTGACCAGATCAGCTTCCCGCTGGGCCAGGCCGGCTACCCCGTGTACAAGTACGTGCCCTATG
GCCCCGTGATGGAGGTGCTGCCCTACTTGTCCCGCCGTGCCCTGGAGAACAGCAGCCTCATGAAGGGCAC
CCATCGGGAGCGGCAGCTGCTGTGGCTGGAGCTCTTGAGGCGGCTCCGAACTGGCAACCTCTTCCATCGC
CCTGCCTAG

Translation (492 aa):
MKMTFYGHFVAGEDQESIQPLLRHYRAFGVSAILDYGVEEDLSPEEAEHKEMESCTSAAERDGSGTNKRD
KQYQAHWAFGDRRNGVISARTYFYANEAKCDSHMETFLRCIEASGRVSDDGFIAIKLTALGRPQFLLQFS
EVLAKWRCFFHQMAVEQGQAGLAAMDTKLEVAVLQESVAKLGIASRAEIEDWFTAETLGVSGTMDLLDWS
SLIDSRTKLSKHLVVPNAQTGQLEPLLSRFTEEEELQMTRMLQRMDVLAKKATEMGVRLMVDAEQTYFQP
AISRLTLEMQRKFNVEKPLIFNTYQCYLKDAYDNVTLDVELARREGWCFGAKLVRGAYLAQERARAAEIG
YEDPINPTYEATNAMYHRCLDYVLEELKHNAKAKVMVASHNEDTVRFALRRMEELGLHPADHRVYFGQLL
GMCDQISFPLGQAGYPVYKYVPYGPVMEVLPYLSRRALENSSLMKGTHRERQLLWLELLRRLRTGNLFHR
PA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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