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Report for CCDS56476.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56476.1 Public Homo sapiens 7 GGCT 24 110 108 CCDS HistoryNCBI Gene:79017Re-query CCDS DB by CCDS ID:56476.1Re-query CCDS DB by GeneID:79017See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56476.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409390.5 ENSP00000387235.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409390.5Link to Ensembl Protein Viewer:ENSP00000387235.1Re-query CCDS DB by Nucleotide ID:ENST00000409390Re-query CCDS DB by Protein ID:ENSP00000387235
Original member Current member NCBI NM_001199815.2 NP_001186744.1 Accepted alive Link to Nucleotide Sequence:NM_001199815.2Link to Protein Sequence:NP_001186744.1Re-query CCDS DB by Nucleotide ID:NM_001199815Re-query CCDS DB by Protein ID:NP_001186744Link to BLAST:NP_001186744.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186744.1 166 O75223-4 166 100% 0 0

Chromosomal Locations for CCDS 56476.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 30497178 30497235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30497741 30497896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30500536 30500681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30504569 30504709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (501 nt):
ATGGCCAACTCGGGCTGCAAGGACGTCACGGGTCCAGATGAGGAGAGTTTTCTGTACTTTGCCTACGGCA
GCAACCTGCTGACAGAGAGGATCCACCTCCGAAACCCCTCGGCGGCGTTCTTCTGTGTGGCCCGCCTGCA
GGATTTTAAGCTTGACTTTGGCAATTCCCAAGGCAAAACAAGTCAAACTTGGCATGGAGGGATAGCCACC
ATTTTTCAGAGTCCTGGCGATGAAGTGTGGGGAGTAGTATGGAAAATGAACAAAAGCAATTTAAATTCTC
TGGATGAGTGGAGAAAGAAACGTCACACTGCCTTTCAGAATCAGGGAAATCACCCTTGCAAGCACAAGAC
AAGAATGTGGGATAGAGACCCCAAAATTCCTGTTCAGAACCTAAGCTTAGCTCTCTGTTGGCAGGCCCAA
TCAGGTCATGGCACCTGTAATAGATTATTTGCATGGGTGCAAAAGAAAATGGTTTGCCGCTGGAGTATCA
AGAGAAGTTAA

Translation (166 aa):
MANSGCKDVTGPDEESFLYFAYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFGNSQGKTSQTWHGGIAT
IFQSPGDEVWGVVWKMNKSNLNSLDEWRKKRHTAFQNQGNHPCKHKTRMWDRDPKIPVQNLSLALCWQAQ
SGHGTCNRLFAWVQKKMVCRWSIKRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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