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Report for CCDS57763.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57763.1 Public Mus musculus X Renbp 23 108 98 CCDS HistoryNCBI Gene:19703Re-query CCDS DB by CCDS ID:57763.1Re-query CCDS DB by GeneID:19703See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57763.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114379.7 ENSMUSP00000110020.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114379.7Link to Ensembl Protein Viewer:ENSMUSP00000110020.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000114379Re-query CCDS DB by Protein ID:ENSMUSP00000110020
Original member NCBI NM_001164704.1 NP_001158176.1 Updated not alive Link to Nucleotide Sequence:NM_001164704.1Link to Protein Sequence:NP_001158176.1Re-query CCDS DB by Nucleotide ID:NM_001164704Re-query CCDS DB by Protein ID:NP_001158176
Current member NCBI NM_001164704.2 NP_001158176.1 Accepted alive Link to Nucleotide Sequence:NM_001164704.2Link to Protein Sequence:NP_001158176.1Re-query CCDS DB by Nucleotide ID:NM_001164704Re-query CCDS DB by Protein ID:NP_001158176Link to BLAST:NP_001158176.1

Chromosomal Locations for CCDS 57763.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 73922139 73922263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73922351 73922438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73926216 73926347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73927813 73927988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73928279 73928360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73929116 73929340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73929681 73929853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73930005 73930080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73930229 73930262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73930408 73930517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73930714 73930743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1251 nt):
ATGATGGACCTAGGACTCCTAATGTTACAGGACATGGAGAAGGAACGGGAGACACTGCAGGTCTGGAAGA
AG
CGTGTGGAACAAGAGCTTGATCGTGTGATCGCTTTCTGGATGGAGCATTCCCATGACCAGGAACACGG
G
GGCTTCTTCACATGTCTTGGCCGTGATGGGAAGGTATGGATGTATTGTCGCTTATACCGCAGTTTTGAG
CGC
TTCCGCCGTGTTGAGCTTCTGGATGCAGCAAGAGCAGGTGGTGAATTTTTGCTGCGTTATGCCCGGG
TG
GCACCACCTGGCAAGAAATGTGCTTTTGTGCTGACTCGGGATGGCCGGCCAGTGAAGGTGCAGCGGAC
C
ATTTTCAGCGAGTGCTTCTACACCATGGCCATGAATGAACTGTGGAAAGTAACGGGGGAAGTGCGTTAT
CAG
AGTGAAGCCATAGAGATGATGGATCAGATCATCCACTGGGTACGGGAGGACCCGGCTGGGTTGGGCC
GG
CCTCAGCTCTCAGGGGCACTGGCCACAGAGCCCATGGCAGTGCCCATGATGCTGCTCAGCCTGGTGGA
G
CAGCTTGGAGAAGAAGATGAGGAGCTGACCAACATGTATGCAGAACTAGGGGACTGGTGTGTCCACAGG
ATT
CTTCAGCATGTCCAGAGGGATGGACAAGTTGTACTGGAGAATGTATCAGAGGATGGAAAAGAGCTTC
CT
GGTTGCCTTGGAAGACATCAGAACCCAGGCCACACACTGGAAGCTGGCTGGTTTCTGCTCCAGTATGC
C
CTCAGGAAAGGTGACCCCAAACTTCGAATGCACATCATTGACAAGTTTCTCTTATTGCCTTTCCACTCT
GGA
TGGGACCCTGAACATGGAGGCCTCTTCTACTTCCAGGATGCGGATGGTCTCTGCCCTACCCAGCTGG
AA
TGGAACATGAAGCTGTGGTGGCCACACAGTGAAGCCATGATTGCCTTCCTCATGGGTTATAGTGACAG
T
GGGGACCCTGCCTTGCTGCATCTCTTCTACAAGGTGGCTGAGTACACCTTCCGCCAGTTTCGTGATCCT
GAG
TATGGGGAATGGTTTGGCTACCTGAACCAAGAGGGAAAGGTGGCCCTCACCATCAAGGGAGGTCCTT
TT
AAAGGCTGCTTCCATGTGCCGCGGTGCCTGGCCATGTGCGAGCAGATTCTAGGAGCCCTACTCCAACG
C
CTTGAGCCCGCCCCCCTCGACTCCTCGCCCGCTGTCTCTACCCATGAAGGCTCGAAATAA


Translation (416 aa):
MMDLGLLMLQDMEKERETLQVWKKRVEQELDRVIAFWMEHSHDQEHGGFFTCLGRDGKVWMYCRLYRSFE
R
FRRVELLDAARA
GGEFLLRYARVAPPGKKCAFVLTRDGRPVKVQRTIFSECFYTMAMNELWKVTGEVRY
Q
SEAIEMMDQIIHWVREDPAGLGRPQLSGALATEPMAVPMMLLSLVEQLGEEDEELTNMYAELGDWCVHR
I
LQHVQ
RDGQVVLENVSEDGKELPGCLGRHQNPGHTLEAGWFLLQYALRKGDPKLRMHIIDKFLLLPFHS
G
WDPEHGGLFYFQDADGLCPTQ
LEWNMKLWWPHSEAMIAFLMGYSDSGDPALLHLFYKVAEYTFRQFRDP
E
YGEWFGYLNQEGKVALTIKGGPFK
GCFHVPRCLAMCEQILGALLQRLEPAPLDSSPAVSTHEGSK



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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