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Report for CCDS58016.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58016.1 Public Homo sapiens 1 AMPD2 24 110 108 CCDS HistoryNCBI Gene:271Re-query CCDS DB by CCDS ID:58016.1Re-query CCDS DB by GeneID:271See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58016.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000531203.6 ENSP00000431975.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000531203.6Link to Ensembl Protein Viewer:ENSP00000431975.2Re-query CCDS DB by Nucleotide ID:ENST00000531203Re-query CCDS DB by Protein ID:ENSP00000431975
Original member Current member EBI ENST00000528454.5 ENSP00000437164.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000528454.5Link to Ensembl Protein Viewer:ENSP00000437164.1Re-query CCDS DB by Nucleotide ID:ENST00000528454Re-query CCDS DB by Protein ID:ENSP00000437164
Original member Current member NCBI NM_001257361.2 NP_001244290.1 Accepted alive Link to Nucleotide Sequence:NM_001257361.2Link to Protein Sequence:NP_001244290.1Re-query CCDS DB by Nucleotide ID:NM_001257361Re-query CCDS DB by Protein ID:NP_001244290Link to BLAST:NP_001244290.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001244290.1 761 Q01433-5 761 100% 0 0

Chromosomal Locations for CCDS 58016.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 109625404 109625433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109625662 109625792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109626160 109626228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109626319 109626427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109626726 109626912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109627175 109627316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109627429 109627518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109627774 109627903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109628083 109628277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109628364 109628495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109628643 109628806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109629109 109629235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109629327 109629490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109629796 109629916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109630233 109630406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109630683 109630793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109630943 109631152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2286 nt):
ATGGATGGCAAATGCAAGGAGATCGCCGAGGAGCTGTTCACCCGCTCACTGGCTGAGAGCGAGCTCCGTA
GTGCCCCGTATGAGTTCCCCGAGGAGAGCCCCATTGAACAGCTGGAGGAGCGGCGGCAGCGGCTGGAGCG
GCAGATCAGCCAGGATGTCAAGCTGGAGCCAGACATCCTGCTTCGGGCCAAGCAAGATTTCCTGAAGACG
GACAGTGACTCGGACCTACAGCTCTACAAGGAACAGGGTGAGGGGCAGGGTGACCGGAGCCTGCGGGAGC
GTGATGTGCTGGAACGGGAGTTTCAGCGGGTCACCATCTCTGGGGAGGAGAAGTGTGGGGTGCCGTTCAC
AGACCTGCTGGATGCAGCCAAGAGTGTGGTGCGGGCGCTCTTCATCCGGGAGAAGTACATGGCCCTGTCC
CTGCAGAGCTTCTGCCCCACCACCCGCCGCTACCTGCAGCAGCTGGCTGAAAAGCCTCTGGAGACCCGGA
CCTATGAACAGGGCCCCGACACCCCTGTGTCTGCTGATGCCCCGGTGCACCCCCCTGCGCTGGAGCAGCA
CCCGTATGAGCACTGTGAGCCAAGCACCATGCCTGGGGACCTGGGCTTGGGTCTGCGCATGGTGCGGGGT
GTGGTGCACGTCTACACCCGCAGGGAACCCGACGAGCATTGCTCAGAGGTGGAGCTGCCATACCCTGACC
TGCAGGAATTTGTGGCTGACGTCAATGTGCTGATGGCCCTGATTATCAATGGCCCCATAAAGTCATTCTG
CTACCGCCGGCTGCAGTACCTGAGCTCCAAGTTCCAGATGCATGTGCTACTCAATGAGATGAAGGAGCTG
GCCGCCCAGAAGAAAGTGCCACACCGAGATTTCTACAACATCCGCAAGGTGGACACCCACATCCATGCCT
CGTCCTGCATGAACCAGAAGCATCTGCTGCGCTTCATCAAGCGGGCAATGAAGCGGCACCTGGAGGAGAT
CGTGCACGTGGAGCAGGGCCGTGAACAGACGCTGCGGGAGGTCTTTGAGAGCATGAATCTCACGGCCTAC
GACCTGAGTGTGGACACGCTGGATGTGCATGCGGACAGGAACACTTTCCATCGCTTTGACAAGTTTAATG
CCAAATACAACCCTATTGGGGAGTCCGTCCTCCGAGAGATCTTCATCAAGACGGACAACAGGGTATCTGG
GAAGTACTTTGCTCACATCATCAAGGAGGTGATGTCAGACCTGGAGGAGAGCAAATACCAGAATGCAGAG
CTGCGGCTCTCCATTTACGGGCGCTCGAGGGATGAGTGGGACAAGCTGGCGCGCTGGGCCGTCATGCACC
GCGTGCACTCCCCCAACGTGCGCTGGCTGGTGCAGGTGCCCCGCCTCTTTGATGTGTACCGTACCAAGGG
CCAGCTGGCCAACTTCCAGGAGATGCTGGAGAACATCTTCCTGCCACTGTTCGAGGCCACTGTGCACCCT
GCCAGCCACCCGGAACTGCATCTCTTCTTAGAGCACGTGGATGGTTTTGACAGCGTGGATGATGAGTCCA
AGCCTGAAAACCATGTCTTCAACCTGGAGAGCCCCCTGCCTGAGGCGTGGGTGGAGGAGGACAACCCACC
CTATGCCTACTACCTGTACTACACCTTTGCCAACATGGCCATGTTGAACCACCTGCGCAGGCAGAGGGGC
TTCCACACGTTTGTGCTGAGGCCACACTGTGGGGAGGCTGGGCCCATCCACCACCTGGTGTCAGCCTTCA
TGCTGGCTGAGAACATTTCCCACGGGCTCCTTCTGCGCAAGGCCCCCGTCCTGCAGTACCTGTACTACCT
GGCCCAGATCGGCATCGCCATGTCTCCGCTCAGCAACAACAGCCTCTTCCTCAGCTATCACCGGAATCCG
CTACCGGAGTACCTGTCCCGCGGCCTCATGGTCTCCCTGTCCACTGATGATCCCTTGCAGTTCCACTTCA
CCAAGGAGCCGCTGATGGAGGAGTACAGCATCGCCACCCAGGTGTGGAAGCTCAGCTCCTGCGATATGTG
TGAGCTGGCCCGCAACAGCGTGCTCATGAGCGGCTTCTCGCACAAGGTAAAGAGCCACTGGCTGGGACCC
AACTATACCAAGGAAGGCCCTGAGGGGAATGACATCCGCCGGACCAATGTGCCAGACATCCGCGTGGGCT
ACCGCTACGAGACCCTGTGCCAGGAGCTGGCGCTCATCACGCAGGCAGTCCAGAGTGAGATGCTGGAGAC
CATTCCAGAGGAGGCGGGTATCACCATGAGCCCAGGGCCTCAATGA

Translation (761 aa):
MDGKCKEIAEELFTRSLAESELRSAPYEFPEESPIEQLEERRQRLERQISQDVKLEPDILLRAKQDFLKT
DSDSDLQLYKEQGEGQGDRSLRERDVLEREFQRVTISGEEKCGVPFTDLLDAAKSVVRALFIREKYMALS
LQSFCPTTRRYLQQLAEKPLETRTYEQGPDTPVSADAPVHPPALEQHPYEHCEPSTMPGDLGLGLRMVRG
VVHVYTRREPDEHCSEVELPYPDLQEFVADVNVLMALIINGPIKSFCYRRLQYLSSKFQMHVLLNEMKEL
AAQKKVPHRDFYNIRKVDTHIHASSCMNQKHLLRFIKRAMKRHLEEIVHVEQGREQTLREVFESMNLTAY
DLSVDTLDVHADRNTFHRFDKFNAKYNPIGESVLREIFIKTDNRVSGKYFAHIIKEVMSDLEESKYQNAE
LRLSIYGRSRDEWDKLARWAVMHRVHSPNVRWLVQVPRLFDVYRTKGQLANFQEMLENIFLPLFEATVHP
ASHPELHLFLEHVDGFDSVDDESKPENHVFNLESPLPEAWVEEDNPPYAYYLYYTFANMAMLNHLRRQRG
FHTFVLRPHCGEAGPIHHLVSAFMLAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLSYHRNP
LPEYLSRGLMVSLSTDDPLQFHFTKEPLMEEYSIATQVWKLSSCDMCELARNSVLMSGFSHKVKSHWLGP
NYTKEGPEGNDIRRTNVPDIRVGYRYETLCQELALITQAVQSEMLETIPEEAGITMSPGPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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