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Report for CCDS58206.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58206.1 Public Homo sapiens 12 TPI1 24 110 108 CCDS HistoryNCBI Gene:7167Re-query CCDS DB by CCDS ID:58206.1Re-query CCDS DB by GeneID:7167See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58206.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000535434.5 ENSP00000443599.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535434.5Link to Ensembl Protein Viewer:ENSP00000443599.1Re-query CCDS DB by Nucleotide ID:ENST00000535434Re-query CCDS DB by Protein ID:ENSP00000443599
Original member Current member EBI ENST00000488464.6 ENSP00000475620.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000488464.6Link to Ensembl Protein Viewer:ENSP00000475620.1Re-query CCDS DB by Nucleotide ID:ENST00000488464Re-query CCDS DB by Protein ID:ENSP00000475620
Original member Current member NCBI NM_001258026.2 NP_001244955.1 Accepted alive Link to Nucleotide Sequence:NM_001258026.2Link to Protein Sequence:NP_001244955.1Re-query CCDS DB by Nucleotide ID:NM_001258026Re-query CCDS DB by Protein ID:NP_001244955Link to BLAST:NP_001244955.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001244955.1 167 P60174-4 167 100% 0 0

Chromosomal Locations for CCDS 58206.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 6869106 6869183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6869258 6869390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6869688 6869773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6870049 6870136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6870265 6870383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (504 nt):
ATGATCAAAGACTGCGGAGCCACGTGGGTGGTCCTGGGGCACTCAGAGAGAAGGCATGTCTTTGGGGAGT
CAGATGAGCTGATTGGGCAGAAAGTGGCCCATGCTCTGGCAGAGGGACTCGGAGTAATCGCCTGCATTGG
GGAGAAGCTAGATGAAAGGGAAGCTGGCATCACTGAGAAGGTTGTTTTCGAGCAGACAAAGGTCATCGCA
GATAACGTGAAGGACTGGAGCAAGGTCGTCCTGGCCTATGAGCCTGTGTGGGCCATTGGTACTGGCAAGA
CTGCAACACCCCAACAGGCCCAGGAAGTACACGAGAAGCTCCGAGGATGGCTGAAGTCCAACGTCTCTGA
TGCGGTGGCTCAGAGCACCCGTATCATTTATGGAGGCTCTGTGACTGGGGCAACCTGCAAGGAGCTGGCC
AGCCAGCCTGATGTGGATGGCTTCCTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGGACATCATCA
ATGCCAAACAATGA

Translation (167 aa):
MIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIA
DNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELA
SQPDVDGFLVGGASLKPEFVDIINAKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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