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Report for CCDS58306.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58306.1 Public Homo sapiens 14 THTPA 24 110 108 CCDS HistoryNCBI Gene:79178Re-query CCDS DB by CCDS ID:58306.1Re-query CCDS DB by GeneID:79178See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58306.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000554970.1 ENSP00000452465.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000554970.1Link to Ensembl Protein Viewer:ENSP00000452465.1Re-query CCDS DB by Nucleotide ID:ENST00000554970Re-query CCDS DB by Protein ID:ENSP00000452465
Original member Current member NCBI NM_001256322.2 NP_001243251.1 Accepted alive Link to Nucleotide Sequence:NM_001256322.2Link to Protein Sequence:NP_001243251.1Re-query CCDS DB by Nucleotide ID:NM_001256322Re-query CCDS DB by Protein ID:NP_001243251Link to BLAST:NP_001243251.1
Original member Current member NCBI NM_001256323.2 NP_001243252.1 Accepted alive Link to Nucleotide Sequence:NM_001256323.2Link to Protein Sequence:NP_001243252.1Re-query CCDS DB by Nucleotide ID:NM_001256323Re-query CCDS DB by Protein ID:NP_001243252Link to BLAST:NP_001243252.1

Chromosomal Locations for CCDS 58306.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 23556758 23557034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23558695 23558840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (423 nt):
ATGGCCCAGGGCTTGATTGAGGTGGAGCGAAAGTTCCTTCCAGGGCCTGGCACAGAGGAGCGGCTGCAGG
AGTTGGGGGGCACCCTGGAGTACCGGGTCACCTTCCGAGACACCTACTATGACACCCCTGAGCTGAGCCT
CATGCAGGCTGACCACTGGCTGCGACGACGAGAGGATAGTGGATGGGAGCTCAAATGTCCTGGAGCAGCA
GGTGTCTTAGGACCCCACACGGAGTATAAGGAACTCACAGCGGAACCTACAATTGTGGCCCAACTCTGTG
TGCCTGCACAGGAGACAGCACCAGCCAAGCTGATTGTGTATCTACAGCGTTTCCGGCCTCAAGACTATCA
GCGCCTGCTAGAAGTGAACAGCTCCAGAGAGAGGCCACAGGAGACTGAAGATCCTGACCACTGCCTGGGC
TAG

Translation (140 aa):
MAQGLIEVERKFLPGPGTEERLQELGGTLEYRVTFRDTYYDTPELSLMQADHWLRRREDSGWELKCPGAA
GVLGPHTEYKELTAEPTIVAQLCVPAQETAPAKLIVYLQRFRPQDYQRLLEVNSSRERPQETEDPDHCLG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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