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Report for CCDS58389.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58389.1 Public Homo sapiens 15 MAN2C1 24 110 108 CCDS HistoryNCBI Gene:4123Re-query CCDS DB by CCDS ID:58389.1Re-query CCDS DB by GeneID:4123See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58389.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000563622.5 ENSP00000454589.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000563622.5Link to Ensembl Protein Viewer:ENSP00000454589.1Re-query CCDS DB by Nucleotide ID:ENST00000563622Re-query CCDS DB by Protein ID:ENSP00000454589
Original member Current member NCBI NM_001256496.2 NP_001243425.1 Accepted alive Link to Nucleotide Sequence:NM_001256496.2Link to Protein Sequence:NP_001243425.1Re-query CCDS DB by Nucleotide ID:NM_001256496Re-query CCDS DB by Protein ID:NP_001243425Link to BLAST:NP_001243425.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243425.1 941 Q9NTJ4-3 941 100% 0 0

Chromosomal Locations for CCDS 58389.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 75355906 75356032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75356110 75356219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75356301 75356449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75356606 75356685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75356793 75356902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75358201 75358344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75358462 75358618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75358704 75358808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75359059 75359153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75359328 75359425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75359620 75359775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75359903 75359988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75360090 75360211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75360565 75360688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75361046 75361191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75361286 75361381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75361604 75361720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75361855 75361947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75362343 75362453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75364488 75364665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75366522 75366592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75367511 75367634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75368073 75368198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75368483 75368583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2826 nt):
ATGGCGGCTGCGCCGGCCTTGAAGCACTGGCGCACCACGCTGGAGCGGGTGGAGAAGTTCGTGTCGCCGC
TCTACTTTACCGACTGTAACCTCCGCGGCAGGCTTTTTGGGGCCAGCTGCCCTGTGGCTGTGCTCTCCAG
CTTCCTGACGCCGGAGAGACTTCCCTACCAGGAGGCAGTCCAGCGGGACTTCCGCCCCGCGCAGGTCGGC
GACAGCTTCGGACCCACATGGTGGACCTGCTGGTTCCGGGTGGAGCTGACCATCCCAGAGGCATGGGTGG
GCCAGGAAGTTCACCTTTGCTGGGAAAGTGATGGAGAAGGTCTGGTGTGGCGTGATGGAGAACCTGTCCA
GGGTTTAACCAAAGAGGGTGAGAAGACCAGCTATGTCCTGACTGACAGGCTGGGGGAAAGAGACCCCCGA
AGCCTCACTCTCTATGTGGAAGTAGCCTGCAATGGGCTCCTGGGGGCCGGGAAGGGAAGCATGATTGCAG
CCCCTGACCCTGAGAAGATGTTCCAGCTGAGCCGGGCTGAGCTAGCTGTGTTCCACCGGGATGTCCACAT
GCTCCTGGTGGATCTGGAGCTGCTGCTGGGCATAGCCAAGGCGCAGCAGCTGGAATGGGTGAAGAGCCGC
TACCCTGGCCTGTACTCCCGCATCCAGGAGTTTGCGTGCCGTGGGCAGTTTGTGCCTGTGGGGGGCACCT
GGGTGGAGATGGATGGGAACCTGCCCAGTGGAGAGGCCATGGTGAGGCAGTTTTTGCAGGGCCAGAACTT
CTTTCTGCAGGAGTTTGGGAAGATGTGCTCTGAGTTCTGGCTGCCGGACACCTTTGGCTACTCAGCACAG
CTCCCCCAGATCATGCACGGCTGTGGCATCAGGCGCTTTCTCACCCAGAAATTGAGCTGGAATTTGGTGA
ACTCCTTCCCACACCATACATTTTTCTGGGAGGGCCTGGATGGCTCCCGTGTACTGGTCCACTTCCCACC
TGGCGACTCCTATGGGATGCAGGGCAGCGTGGAGGAGGTGCTGAAGACCGTGGCCAACAACCGGGACAAG
GGGCGGGCCAACCACAGTGCCTTCCTCTTTGGCTTTGGGGATGGGGGTGGTGGCCCCACCCAGACCATGC
TGGACCGCCTGAAGCGCCTGAGCAATACGGATGGGCTGCCCAGGGTGCAGCTATCTTCTCCAAGACAGCT
CTTCTCAGCACTGGAGAGTGACTCAGAGCAGCTGTGCACGTGGGTTGGGGAGCTCTTCTTGGAGCTGCAC
AATGGCACATACACCACCCATGCCCAGATCAAGAAGGGGAACCGGGAATGTGAGCGGATCCTGCACGACG
TGGAGCTGCTCAGTAGCCTGGCCCTGGCCCGCAGTGCCCAGTTCCTATACCCAGCAGCCCAGCTGCAGCA
CCTCTGGAGGCTCCTTCTTCTGAACCAGTTCCATGATGTGGTGACTGGAAGCTGCATCCAGATGGTGGCA
GAGGAAGCCATGTGCCATTATGAAGACATCCGTTCCCATGGCAATACACTGCTCAGCGCTGCAGCCGCAG
CCCTGTGTGCTGGGGAGCCAGGTCCTGAGGGCCTCCTCATCGTCAACACACTGCCCTGGAAGCGGATCGA
AGTGATGGCCCTGCCCAAACCGGGCGGGGCCCACAGCCTAGCCCTGGTGACAGTGCCCAGCATGGGCTAT
GCTCCTGTTCCTCCCCCCACCTCACTGCAGCCCCTGCTGCCCCAGCAGCCTGTGTTCGTAGTGCAAGAGA
CTGATGGCTCCGTGACTCTGGACAATGGCATCATCCGAGTGAAGCTGGACCCAACTGGTCGCCTGACGTC
CTTGGTCCTGGTGGCCTCTGGCAGGGAGGCCATTGCTGAGGGCGCCGTGGGGAACCAGTTTGTGCTATTT
GATGATGTCCCCTTGTACTGGGATGCATGGGACGTCATGGACTACCACCTGGAGACACGGAAGCCTGTGC
TGGGCCAGGCAGGGACCCTGGCAGTGGGCACCGAGGGCGGCCTGCGGGGCAGCGCCTGGTTCTTGCTACA
GATCAGCCCCAACAGTCGGCTTAGCCAGGAGGTTGTGCTGGACGTTGGCTGCCCCTATGTCCGCTTCCAC
ACCGAGGTACACTGGCATGAGGCCCACAAGTTCCTGAAGGTGGAGTTCCCTGCTCGCGTGCGGAGTTCCC
AGGCCACCTATGAGATCCAGTTTGGGCACCTGCAGCGACCTACCCACTACAATACCTCTTGGGACTGGGC
TCGATTTGAGGTGTGGGCCCATCGCTGGATGGATCTGTCAGAACACGGCTTTGGGCTGGCCCTGCTCAAC
GACTGCAAGTATGGCGCGTCAGTGCGAGGCAGCATCCTCAGCCTCTCGCTCTTGCGGGCGCCTAAAGCCC
CGGACGCTACTGCTGACACGGGGCGCCACGAGTTCACCTATGCACTGATGCCGCACAAGGGCTCTTTCCA
GGATGCTGGCGTTATCCAAGCTGCCTACAGCCTAAACTTCCCCCTGTTGGCTCTGCCAGCCCCCAGCCCA
GCGCCCGCCACCTCCTGGAGTGCGTTTTCCGTGTCTTCACCCGCGGTCGTATTGGAGACCGTCAAGCAGG
CGGAGAGCAGCCCCCAGCGCCGCTCGCTGGTCCTGAGGCTGTATGAGGCCCACGGCAGCCACGTGGACTG
CTGGCTGCACTTGTCGCTGCCGGTTCAGGAGGCCATCCTCTGCGATCTCTTGGAGCGACCAGACCCTGCT
GGCCACTTGACCCTTCGGGACAACCGCCTGAAGCTCACCTTTTCTCCCTTCCAAGTGCTGTCCCTGTTGC
TCGTGCTTCAGCCTCCGCCACACTGA

Translation (941 aa):
MAAAPALKHWRTTLERVEKFVSPLYFTDCNLRGRLFGASCPVAVLSSFLTPERLPYQEAVQRDFRPAQVG
DSFGPTWWTCWFRVELTIPEAWVGQEVHLCWESDGEGLVWRDGEPVQGLTKEGEKTSYVLTDRLGERDPR
SLTLYVEVACNGLLGAGKGSMIAAPDPEKMFQLSRAELAVFHRDVHMLLVDLELLLGIAKAQQLEWVKSR
YPGLYSRIQEFACRGQFVPVGGTWVEMDGNLPSGEAMVRQFLQGQNFFLQEFGKMCSEFWLPDTFGYSAQ
LPQIMHGCGIRRFLTQKLSWNLVNSFPHHTFFWEGLDGSRVLVHFPPGDSYGMQGSVEEVLKTVANNRDK
GRANHSAFLFGFGDGGGGPTQTMLDRLKRLSNTDGLPRVQLSSPRQLFSALESDSEQLCTWVGELFLELH
NGTYTTHAQIKKGNRECERILHDVELLSSLALARSAQFLYPAAQLQHLWRLLLLNQFHDVVTGSCIQMVA
EEAMCHYEDIRSHGNTLLSAAAAALCAGEPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLALVTVPSMGY
APVPPPTSLQPLLPQQPVFVVQETDGSVTLDNGIIRVKLDPTGRLTSLVLVASGREAIAEGAVGNQFVLF
DDVPLYWDAWDVMDYHLETRKPVLGQAGTLAVGTEGGLRGSAWFLLQISPNSRLSQEVVLDVGCPYVRFH
TEVHWHEAHKFLKVEFPARVRSSQATYEIQFGHLQRPTHYNTSWDWARFEVWAHRWMDLSEHGFGLALLN
DCKYGASVRGSILSLSLLRAPKAPDATADTGRHEFTYALMPHKGSFQDAGVIQAAYSLNFPLLALPAPSP
APATSWSAFSVSSPAVVLETVKQAESSPQRRSLVLRLYEAHGSHVDCWLHLSLPVQEAILCDLLERPDPA
GHLTLRDNRLKLTFSPFQVLSLLLVLQPPPH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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