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Report for CCDS58636.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58636.1 Public Homo sapiens 19 PLPPR3 24 110 108 CCDS HistoryNCBI Gene:79948Re-query CCDS DB by CCDS ID:58636.1Re-query CCDS DB by GeneID:79948See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58636.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000520876.8 ENSP00000430297.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000520876.8Link to Ensembl Protein Viewer:ENSP00000430297.1Re-query CCDS DB by Nucleotide ID:ENST00000520876Re-query CCDS DB by Protein ID:ENSP00000430297
Original member Current member NCBI NM_001270366.2 NP_001257295.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001270366.2Link to Protein Sequence:NP_001257295.1Re-query CCDS DB by Nucleotide ID:NM_001270366Re-query CCDS DB by Protein ID:NP_001257295Link to BLAST:NP_001257295.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257295.1 718 Q6T4P5-1 718 100% 0 0

Chromosomal Locations for CCDS 58636.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 812570 813895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 814434 814607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 814692 814749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 814886 815081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 815186 815327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 815666 815851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 821485 821559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2157 nt):
ATGATCTCCACCAAGGAGAAGAACAAGATCCCGAAGGACAGCATGACGCTTCTGCCCTGCTTCTACTTCG
TGGAGCTGCCCATAGTGGCTTCTTCCATCGTATCCTTGTACTTCCTGGAGCTGACCGACCTCTTCAAGCC
GGCCAAGGTGGGCTTCCAGTGCTATGACCGCACTCTCTCCATGCCCTACGTGGAGACCAACGAGGAGCTC
ATCCCGCTGCTGATGCTGCTCAGCTTGGCCTTCGCGGCCCCTGCCGCCTCGATCATGGTGGCCGAGGGCA
TGTTGTACTGTCTGCAGTCCCGGCTGTGGGGCCGTGCCGGGGGGCCCGCCGGGGCGGAGGGCAGCATCAA
CGCCGGCGGCTGCAACTTCAACTCCTTCCTGCGGCGTACGGTGCGGTTTGTGGGTGTCCACGTGTTCGGC
CTGTGTGCCACAGCCCTGGTGACGGACGTGATCCAGCTGGCCACGGGTTACCACACTCCCTTCTTCCTCA
CCGTCTGCAAGCCCAACTACACTCTCCTGGGCACGTCCTGCGAGGTCAACCCCTACATCACGCAGGACAT
CTGCTCCGGCCACGACATCCACGCCATCCTGTCTGCACGGAAGACCTTCCCGTCCCAGCACGCCACGCTG
TCAGCCTTCGCCGCGGTCTATGTGTCGATGTACTTCAACTCGGTCATCTCGGACACCACCAAGCTGCTGA
AGCCCATCCTGGTCTTCGCCTTTGCCATCGCCGCGGGCGTATGCGGGCTCACGCAGATCACGCAGTACCG
CAGCCACCCTGTGGACGTGTATGCCGGCTTCCTCATCGGGGCGGGCATCGCTGCCTACCTGGCCTGCCAC
GCGGTGGGCAACTTCCAGGCCCCACCTGCAGAGAAGCCCGCGGCCCCGGCCCCCGCCAAGGACGCGCTGC
GGGCCCTGACGCAGCGGGGCCACGACTCGGTTTATCAGCAGAATAAGTCGGTGAGCACCGACGAGCTGGG
GCCCCCAGGGCGGCTGGAGGGCGCGCCCCGGCCCGTGGCCCGCGAGAAGACCTCGCTGGGCAGCCTGAAG
CGCGCCAGCGTGGACGTGGACCTGCTGGCCCCGCGCAGCCCCATGGCCAAGGAGAACATGGTGACCTTCA
GCCACACGCTGCCCAGGGCCAGCGCGCCCTCGCTGGACGACCCCGCGCGCCGCCACATGACCATCCACGT
GCCGCTGGACGCCTCGCGCTCCAAGCAGCTCATCAGCGAGTGGAAGCAGAAGAGCCTGGAGGGCCGCGGC
CTGGGGCTGCCCGACGACGCCAGCCCCGGGCACCTGCGCGCGCCCGCCGAACCCATGGCGGAGGAGGAGG
AAGAGGAGGAGGACGAAGAGGAAGAGGAGGAGGAGGAAGAGGAGGAGGACGAGGGCCCGGCCCCGCCCTC
GCTCTACCCCACCGTGCAGGCGCGGCCGGGGCTGGGGCCTCGGGTCATCCTCCCACCGCGCGCGGGGCCG
CCGCCGCTGGTGCACATCCCGGAGGAGGGCGCGCAGACGGGGGCCGGCCTGTCCCCCAAAAGCGGCGCCG
GGGTGCGCGCCAAGTGGCTCATGATGGCCGAGAAGAGCGGGGCGGCAGTGGCCAACCCTCCGCGGCTGCT
GCAGGTCATCGCCATGTCCAAGGCTCCGGGCGCGCCGGGCCCCAAGGCGGCCGAGACGGCGTCGTCGTCC
AGCGCCAGCTCCGACTCCTCGCAGTACCGGTCGCCGTCGGACCGCGACTCCGCCAGCATCGTGACCATCG
ACGCGCACGCGCCGCACCACCCCGTGGTGCACCTGTCGGCCGGCGGCGCGCCCTGGGAGTGGAAGGCGGC
GGGCGGCGGGGCCAAGGCGGAGGCCGACGGCGGCTACGAGCTGGGGGACCTGGCGCGCGGCTTCCGCGGC
GGGGCCAAGCCCCCGGGCGTGTCCCCCGGCTCGTCGGTCAGCGACGTGGACCAGGAGGAGCCGCGGTTCG
GGGCCGTGGCCACCGTCAACCTGGCCACGGGCGAGGGGCTGCCCCCGCTGGGCGCGGCCGATGGGGCGCT
GGGCCCGGGCAGCCGGGAGTCCACGCTGCGGCGCCACGCGGGCGGCCTGGGGCTGGCGGAGCGCGAGGCG
GAGGCGGAGGCCGAGGGCTACTTCCGCAAGATGCAGGCGCGCCGCTTCCCCGACTAG

Translation (718 aa):
MISTKEKNKIPKDSMTLLPCFYFVELPIVASSIVSLYFLELTDLFKPAKVGFQCYDRTLSMPYVETNEEL
IPLLMLLSLAFAAPAASIMVAEGMLYCLQSRLWGRAGGPAGAEGSINAGGCNFNSFLRRTVRFVGVHVFG
LCATALVTDVIQLATGYHTPFFLTVCKPNYTLLGTSCEVNPYITQDICSGHDIHAILSARKTFPSQHATL
SAFAAVYVSMYFNSVISDTTKLLKPILVFAFAIAAGVCGLTQITQYRSHPVDVYAGFLIGAGIAAYLACH
AVGNFQAPPAEKPAAPAPAKDALRALTQRGHDSVYQQNKSVSTDELGPPGRLEGAPRPVAREKTSLGSLK
RASVDVDLLAPRSPMAKENMVTFSHTLPRASAPSLDDPARRHMTIHVPLDASRSKQLISEWKQKSLEGRG
LGLPDDASPGHLRAPAEPMAEEEEEEEDEEEEEEEEEEEDEGPAPPSLYPTVQARPGLGPRVILPPRAGP
PPLVHIPEEGAQTGAGLSPKSGAGVRAKWLMMAEKSGAAVANPPRLLQVIAMSKAPGAPGPKAAETASSS
SASSDSSQYRSPSDRDSASIVTIDAHAPHHPVVHLSAGGAPWEWKAAGGGAKAEADGGYELGDLARGFRG
GAKPPGVSPGSSVSDVDQEEPRFGAVATVNLATGEGLPPLGAADGALGPGSRESTLRRHAGGLGLAEREA
EAEAEGYFRKMQARRFPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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