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Report for CCDS593.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
593.1 Public Homo sapiens 1 ACOT11 24 110 108 CCDS HistoryNCBI Gene:26027Re-query CCDS DB by CCDS ID:593.1Re-query CCDS DB by GeneID:26027See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 593.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343744.7 ENSP00000340260.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000343744.7Link to Ensembl Protein Viewer:ENSP00000340260.2Re-query CCDS DB by Nucleotide ID:ENST00000343744Re-query CCDS DB by Protein ID:ENSP00000340260
Original member Current member NCBI NM_147161.4 NP_671517.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_147161.4Link to Protein Sequence:NP_671517.1Re-query CCDS DB by Nucleotide ID:NM_147161Re-query CCDS DB by Protein ID:NP_671517Link to BLAST:NP_671517.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_671517.1 594 Q8WXI4-2 594 100% 0 0

Chromosomal Locations for CCDS 593.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 54548310 54548342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54584655 54584862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54585835 54585904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54592546 54592606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54593941 54594039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54594556 54594691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54597259 54597415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54599296 54599415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54601269 54601413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54602669 54602724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54603871 54603937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54604346 54604429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54605076 54605209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54607134 54607265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54607942 54608068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54608957 54609112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1785 nt):
ATGATCCAGAATGTCGGAAATCACCTGCGACGGGGCTTGGCCTCTGTGTTCTCCAACCGCACATCCCGGA
AGTCAGCCTTACGTGCGGGGAACGACAGTGCCATGGCAGACGGCGAGGGATACCGGAACCCCACGGAGGT
GCAGATGAGCCAGCTGGTGCTGCCCTGCCACACCAACCAACGTGGTGAGCTGAGCGTCGGGCAGCTGCTC
AAGTGGATTGACACCACGGCTTGCCTGTCCGCGGAGAGGCACGCTGGCTGCCCCTGTGTCACAGCTTCCA
TGGATGACATCTATTTTGAGCACACCATTAGTGTTGGACAAGTGGTGAATATCAAGGCCAAGGTGAACCG
GGCCTTCAACTCCAGCATGGAGGTGGGCATCCAGGTGGCCTCGGAGGACCTGTGCTCTGAGAAGCAGTGG
AATGTGTGCAAGGCCTTGGCCACCTTCGTGGCCCGCCGAGAGATCACCAAGGTGAAGCTGAAGCAGATCA
CGCCGCGGACAGAAGAGGAGAAGATGGAGCACAGTGTGGCGGCTGAGCGCCGGCGCATGCGCCTTGTCTA
TGCAGACACCATCAAGGACCTCCTGGCCAACTGCGCCATTCAGGGCGATCTGGAGAGCAGAGACTGTAGC
CGCATGGTGCCGGCTGAGAAGACCCGTGTGGAGAGTGTGGAGCTGGTCCTGCCTCCCCACGCCAATCACC
AGGGCAACACCTTTGGGGGCCAGATCATGGCCTGGATGGAGAATGTGGCCACCATTGCAGCCAGCCGGCT
CTGCCGTGCCCACCCTACGCTGAAGGCCATTGAAATGTTCCACTTCCGAGGCCCGTCCCAGGTCGGCGAC
CGTCTGGTGCTCAAAGCCATCGTGAACAATGCCTTCAAACATAGCATGGAGGTGGGCGTGTGCGTGGAGG
CCTATCGCCAGGAGGCTGAGACCCACCGGCGCCACATCAACAGTGCCTTTATGACCTTTGTGGTCCTGGA
CGCAGATGACCAGCCCCAGTTGCTGCCCTGGATTCGGCCCCAGCCCGGCGATGGTGAGCGGCGGTACCGA
GAGGCCAGTGCCAGAAAGAAGATCCGCCTGGACAGGAAGTACATCGTGTCCTGTAAGCAGACAGAGGTGC
CCCTCTCCGTCCCCTGGGACCCTAGCAACCAGGTGTACCTGAGCTACAATAACGTCTCCTCCTTGAAGAT
GCTTGTGGCCAAGGACAACTGGGTGCTGTCCTCGGAGATCAGTCAGGTCCGCCTGTACACTCTGGAGGAT
GACAAGTTCCTCTCCTTCCACATGGAGATGGTGGTGCATGTGGATGCAGCCCAGGCCTTCCTGCTGCTCT
CGGACCTGCGTCAGAGGCCAGAGTGGGACAAGCACTACCGGAGCGTGGAGCTAGTGCAGCAGGTAGACGA
GGACGACGCCATCTACCACGTCACCAGCCCTGCCCTCGGAGGTCACACAAAGCCCCAGGACTTCGTGATC
CTGGCCTCGAGGCGGAAGCCTTGTGACAATGGGGACCCCTATGTCATCGCGCTGAGGTCGGTCACGCTGC
CCACACACCGAGAGACGCCAGAGTACAGACGCGGAGAGACCCTCTGCTCAGGCTTCTGCCTCTGGCGCGA
GGGGGACCAGCTGACCAAGGTATCCTACTACAACCAGGCCACCCCAGGTGTTCTCAACTATGTGACCACC
AACGTGGCCGGCCTCTCCTCTGAGTTCTACACCACCTTCAAGGCTTGTGAGCAGTTTCTCTTGGACAACC
GGAATGATCTGGCCCCCAGCCTCCAGACCCTCTAG

Translation (594 aa):
MIQNVGNHLRRGLASVFSNRTSRKSALRAGNDSAMADGEGYRNPTEVQMSQLVLPCHTNQRGELSVGQLL
KWIDTTACLSAERHAGCPCVTASMDDIYFEHTISVGQVVNIKAKVNRAFNSSMEVGIQVASEDLCSEKQW
NVCKALATFVARREITKVKLKQITPRTEEEKMEHSVAAERRRMRLVYADTIKDLLANCAIQGDLESRDCS
RMVPAEKTRVESVELVLPPHANHQGNTFGGQIMAWMENVATIAASRLCRAHPTLKAIEMFHFRGPSQVGD
RLVLKAIVNNAFKHSMEVGVCVEAYRQEAETHRRHINSAFMTFVVLDADDQPQLLPWIRPQPGDGERRYR
EASARKKIRLDRKYIVSCKQTEVPLSVPWDPSNQVYLSYNNVSSLKMLVAKDNWVLSSEISQVRLYTLED
DKFLSFHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTSPALGGHTKPQDFVI
LASRRKPCDNGDPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQLTKVSYYNQATPGVLNYVTT
NVAGLSSEFYTTFKACEQFLLDNRNDLAPSLQTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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