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Report for CCDS59301.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59301.1 Public Homo sapiens 17 SLC25A10 24 110 108 CCDS HistoryNCBI Gene:1468Re-query CCDS DB by CCDS ID:59301.1Re-query CCDS DB by GeneID:1468See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59301.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331531.9 ENSP00000328403.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000331531.9Link to Ensembl Protein Viewer:ENSP00000328403.5Re-query CCDS DB by Nucleotide ID:ENST00000331531Re-query CCDS DB by Protein ID:ENSP00000328403
Original member Current member NCBI NM_001270888.2 NP_001257817.1 Accepted alive Link to Nucleotide Sequence:NM_001270888.2Link to Protein Sequence:NP_001257817.1Re-query CCDS DB by Nucleotide ID:NM_001270888Re-query CCDS DB by Protein ID:NP_001257817Link to BLAST:NP_001257817.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257817.1 296 Q9UBX3-2 296 100% 0 0

Chromosomal Locations for CCDS 59301.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 81712427 81712519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81714953 81715072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81715478 81715592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81715693 81715741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81716009 81716050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81716812 81716855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81717002 81717072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81717399 81717491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81717757 81717861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81719831 81719887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81719976 81720077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (891 nt):
ATGGCAGCCGAGGCGCGCGTGTCGCGCTGGTACTTCGGGGGGCTGGCCTCCTGCGGGGCCGCCTGCTGCA
CGCACCCGCTGGACCTGCTCAAGGTGCATCTGCAGACGCAGCAGGAGGTGAAGCTGCGCATGACGGGCAT
GGCGCTGCGGGTGGTGCGTACCGACGGCATCCTGGCACTCTACAGCGGCCTGAGCGCCTCGCTGTGCAGA
CAGATGACCTACTCCCTGACTCGGTTCGCCATCTACGAGACTGTGCGGGACCGTGTGGCCAAGGGCAGCC
AGGGGCCTCTCCCCTTCCACGAGAAGGTGTTGCTGGGCTCCGTCAGCGGTTTAGCTGGAGGCTTCGTGGG
GACGCCCGCAGACTTGGTCAACGTCAGGATGCAGAACGACGTGAAGCTGCCCCAGGGTCAGCGGCGCAAC
TACGCCCATGCGCTGGATGGCCTGTACCGCGTAGCTCGTGAAGAGGGTCTCAGGAGACTGTTCTCGGGTG
CAACCATGGCATCCAGCCGAGGGGCCTTAGTCACTGTGGGCCAGCTGTCCTGCTACGACCAGGCCAAGCA
GCTGGTCCTTAGCACCGGGTACCTCTCTGACAACATCTTCACTCACTTTGTCGCCAGCTTTATTGCAGCC
GCTGGTGACGAGCCCCCTCCTCAGGGTGGATGTGCCACGTTCCTGTGCCAGCCCCTGGATGTGCTGAAGA
CTCGCCTGATGAACTCCAAGGGGGAGTATCAGGGCGTTTTCCACTGCGCCGTGGAGACAGCGAAGCTCGG
GCCTCTGGCCTTTTACAAGGGCCTCGTCCCAGCTGGCATCCGCCTCATCCCCCACACCGTGCTCACTTTT
GTGTTTCTGGAACAGCTACGCAAAAACTTTGGCATCAAAGTGCCATCCTGA

Translation (296 aa):
MAAEARVSRWYFGGLASCGAACCTHPLDLLKVHLQTQQEVKLRMTGMALRVVRTDGILALYSGLSASLCR
QMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRN
YAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAA
AGDEPPPQGGCATFLCQPLDVLKTRLMNSKGEYQGVFHCAVETAKLGPLAFYKGLVPAGIRLIPHTVLTF
VFLEQLRKNFGIKVPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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