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Report for CCDS59352.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59352.1 Public Homo sapiens 19 PLPPR2 24 110 108 CCDS HistoryNCBI Gene:64748Re-query CCDS DB by CCDS ID:59352.1Re-query CCDS DB by GeneID:64748See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59352.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000591608.2 ENSP00000466898.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591608.2Link to Ensembl Protein Viewer:ENSP00000466898.1Re-query CCDS DB by Nucleotide ID:ENST00000591608Re-query CCDS DB by Protein ID:ENSP00000466898
Original member Current member NCBI NM_001170635.2 NP_001164106.1 Accepted alive Link to Nucleotide Sequence:NM_001170635.2Link to Protein Sequence:NP_001164106.1Re-query CCDS DB by Nucleotide ID:NM_001170635Re-query CCDS DB by Protein ID:NP_001164106Link to BLAST:NP_001164106.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001164106.1 427 Q96GM1-2 427 100% 0 0

Chromosomal Locations for CCDS 59352.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 11357674 11357739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11359607 11359720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11359821 11359956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11361217 11361488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11362513 11362689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11363713 11363835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11364161 11364212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11364347 11364690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1284 nt):
ATGGCGGGAGGGAGACCGCATCTGAAGAGGAGTTTCTCCATCATCCCCTGCTTTGTCTTCGTGGAGGGAT
TCTTCTGCTATGACAGTACCTACGCCAAGCCCTACCCAGGGCCTGAGGCTGCCAGCCGAGTGCCTCCTGC
TCTTGTCTACGCACTGGTCACTGCCGGGCCCACCCTCACGATCCTGCTGGGAGAGCTGGCGCGTGCCTTT
TTCCCTGCACCACCTTCAGCCGTCCCAGTCATCGGGGAGAGCACCATCGTGTCTGGGGCCTGCTGCCGCT
TCAGCCCCCCAGTGCGGAGGCTGGTCCGCTTCCTGGGGGTCTACTCCTTCGGCCTCTTCACCACGACCAT
CTTCGCCAACGCGGGGCAGGTGGTGACCGGCAATCCCACGCCACACTTCCTGTCCGTGTGCCGCCCCAAC
TACACGGCCCTGGGCTGCCTGCCACCTTCTCCGGATCGGCCAGGTCCCGACCGCTTTGTCACTGACCAGG
GTGCCTGCGCTGGCAGTCCCAGCCTCGTGGCCGCCGCGCGCCGCGCCTTCCCCTGCAAGGATGCGGCCCT
CTGCGCCTACGCGGTCACCTACACAGCGATGTACGTGACTCTCGTGTTCCGCGTGAAGGGCTCCCGCCTG
GTCAAACCCTCGCTCTGCCTGGCCTTGCTGTGCCCGGCCTTCCTGGTGGGCGTGGTCCGCGTGGCCGAGT
ACCGAAACCACTGGTCGGACGTGCTGGCTGGCTTCCTGACAGGGGCGGCCATCGCCACCTTTTTGGTCAC
CTGCGTTGTGCATAACTTTCAGAGCCGGCCACCCTCTGGCCGAAGGCTCTCTCCCTGGGAGGACCTGGGC
CAAGCCCCCACCATGGATAGCCCCCTCGAAAAGTTAAGTGTGGCGCAGGAACCCGAGGTCTGCAGGCCGC
ATTCGACACCGGCACGGCTCACCCCATCCAAGTCGCAGAACTGCGCCCGCCGTGGCCACCTGATCCCCAG
CTGTGTCTCCTCCAGGGCCCCAGCCATGTGTTCGTCGCCCCGTGTGCCCCGTCCTCGATTGAGGTCTGAG
CCGACGCCCTTGCCCCTGCCCCTACCCCTGCCAGCGCCCACCCCCAGCCAGGGCCCCTCGCCTTCCTCCC
CTGGACCTGGGGGGCCAGGCGGGGGTGGTGGACGTGGCCGGAAGCTGCTGCTGCCCACGCCCCTGCTGCG
GGACCTGTACACCCTGAGTGGACTCTATCCCTCCCCCTTCCACCGGGACAACTTCAGCCCTTACCTGTTT
GCCAGCCGTGACCACCTGCTGTGA

Translation (427 aa):
MAGGRPHLKRSFSIIPCFVFVEGFFCYDSTYAKPYPGPEAASRVPPALVYALVTAGPTLTILLGELARAF
FPAPPSAVPVIGESTIVSGACCRFSPPVRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPN
YTALGCLPPSPDRPGPDRFVTDQGACAGSPSLVAAARRAFPCKDAALCAYAVTYTAMYVTLVFRVKGSRL
VKPSLCLALLCPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIATFLVTCVVHNFQSRPPSGRRLSPWEDLG
QAPTMDSPLEKLSVAQEPEVCRPHSTPARLTPSKSQNCARRGHLIPSCVSSRAPAMCSSPRVPRPRLRSE
PTPLPLPLPLPAPTPSQGPSPSSPGPGGPGGGGGRGRKLLLPTPLLRDLYTLSGLYPSPFHRDNFSPYLF
ASRDHLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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