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Report for CCDS6051.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6051.1 Public Homo sapiens 8 DPYSL2 24 110 108 CCDS HistoryNCBI Gene:1808Re-query CCDS DB by CCDS ID:6051.1Re-query CCDS DB by GeneID:1808See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6051.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311151.9 ENSP00000309539.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000311151.9Link to Ensembl Protein Viewer:ENSP00000309539.5Re-query CCDS DB by Nucleotide ID:ENST00000311151Re-query CCDS DB by Protein ID:ENSP00000309539
Original member Current member NCBI NM_001386.6 NP_001377.1 Accepted alive Link to Nucleotide Sequence:NM_001386.6Link to Protein Sequence:NP_001377.1Re-query CCDS DB by Nucleotide ID:NM_001386Re-query CCDS DB by Protein ID:NP_001377Link to BLAST:NP_001377.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001377.1 572 Q16555-1 572 100% 0 0

Chromosomal Locations for CCDS 6051.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 26578255 26578293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26581969 26582057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26583799 26583983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26624143 26624307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26626617 26626678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26627215 26627295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26627872 26627940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26634780 26634900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26643439 26643595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26643950 26644091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26647630 26647800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26652257 26652436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26653232 26653397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 26655615 26655706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1719 nt):
ATGTCTTATCAGGGGAAGAAAAATATTCCACGCATCACGAGCGATCGTCTTCTGATCAAAGGAGGTAAAA
TTGTTAATGATGACCAGTCGTTCTATGCAGACATATACATGGAAGATGGGTTGATCAAGCAAATAGGAGA
AAATCTGATTGTGCCAGGAGGAGTGAAGACCATCGAGGCCCACTCCCGGATGGTGATCCCCGGAGGAATT
GACGTCCACACTCGTTTCCAGATGCCTGATCAGGGAATGACGTCTGCTGATGATTTCTTCCAAGGAACCA
AGGCGGCCCTGGCTGGGGGAACCACTATGATCATTGACCACGTTGTTCCTGAGCCTGGGACAAGCCTGCT
CGCTGCCTTTGACCAGTGGAGGGAATGGGCCGACAGCAAGTCCTGCTGTGACTACTCTCTGCATGTGGAC
ATCAGTGAGTGGCATAAGGGCATCCAGGAGGAGATGGAAGCGCTTGTGAAGGATCACGGGGTAAATTCCT
TCCTCGTGTACATGGCTTTCAAAGATCGCTTCCAGCTAACGGATTGCCAGATTTATGAAGTACTGAGTGT
GATCCGGGATATTGGCGCCATAGCCCAAGTCCACGCAGAAAATGGCGACATCATTGCAGAGGAGCAGCAG
AGGATCCTGGATCTGGGCATCACGGGCCCCGAGGGACATGTGCTGAGCCGACCTGAGGAGGTCGAGGCCG
AAGCCGTGAATCGTGCCATCACCATCGCCAACCAGACCAACTGCCCGCTGTATATCACCAAGGTGATGAG
CAAAAGCTCTGCTGAGGTCATCGCCCAGGCACGGAAGAAGGGAACTGTGGTGTATGGCGAGCCCATCACT
GCCAGCTTGGGAACGGACGGCTCCCATTACTGGAGCAAGAACTGGGCCAAGGCTGCTGCCTTTGTCACCT
CCCCACCCTTGAGCCCTGATCCAACCACTCCAGACTTTCTCAACTCCTTGCTGTCCTGTGGAGACCTCCA
GGTCACGGGCAGTGCCCATTGCACGTTTAACACTGCCCAGAAGGCTGTAGGAAAGGACAACTTCACCCTG
ATTCCGGAGGGCACCAATGGCACTGAGGAGCGGATGTCCGTCATCTGGGACAAGGCTGTGGTCACTGGGA
AGATGGATGAGAACCAGTTTGTGGCTGTGACCAGCACCAATGCAGCCAAAGTCTTCAACCTTTACCCCCG
GAAAGGCCGCATTGCTGTGGGATCCGATGCCGACCTGGTCATCTGGGACCCCGACAGCGTTAAAACCATC
TCTGCCAAGACACACAACAGCTCTCTCGAGTACAACATCTTTGAAGGCATGGAGTGCCGCGGCTCCCCAC
TGGTGGTCATCAGCCAGGGGAAGATTGTCCTGGAGGACGGCACCCTGCATGTCACCGAAGGCTCTGGACG
CTACATTCCCCGGAAGCCCTTCCCTGATTTTGTTTACAAGCGTATCAAGGCAAGGAGCAGGCTGGCTGAG
CTGAGAGGGGTTCCTCGTGGCCTGTATGACGGACCTGTGTGTGAAGTGTCTGTGACGCCCAAGACAGTCA
CTCCAGCCTCCTCGGCCAAGACGTCTCCTGCCAAGCAGCAGGCCCCACCTGTCCGGAACCTGCACCAGTC
TGGATTCAGTTTGTCTGGTGCTCAGATTGATGACAACATTCCCCGCCGCACCACCCAGCGTATCGTGGCG
CCCCCCGGTGGCCGTGCCAACATCACCAGCCTGGGCTAG

Translation (572 aa):
MSYQGKKNIPRITSDRLLIKGGKIVNDDQSFYADIYMEDGLIKQIGENLIVPGGVKTIEAHSRMVIPGGI
DVHTRFQMPDQGMTSADDFFQGTKAALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDYSLHVD
ISEWHKGIQEEMEALVKDHGVNSFLVYMAFKDRFQLTDCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQ
RILDLGITGPEGHVLSRPEEVEAEAVNRAITIANQTNCPLYITKVMSKSSAEVIAQARKKGTVVYGEPIT
ASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTFNTAQKAVGKDNFTL
IPEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKVFNLYPRKGRIAVGSDADLVIWDPDSVKTI
SAKTHNSSLEYNIFEGMECRGSPLVVISQGKIVLEDGTLHVTEGSGRYIPRKPFPDFVYKRIKARSRLAE
LRGVPRGLYDGPVCEVSVTPKTVTPASSAKTSPAKQQAPPVRNLHQSGFSLSGAQIDDNIPRRTTQRIVA
PPGGRANITSLG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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