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Report for CCDS60558.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60558.1 Public Homo sapiens 10 FUT11 24 110 108 CCDS HistoryNCBI Gene:170384Re-query CCDS DB by CCDS ID:60558.1Re-query CCDS DB by GeneID:170384See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 60558.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394790.2 ENSP00000378270.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394790.2Link to Ensembl Protein Viewer:ENSP00000378270.1Re-query CCDS DB by Nucleotide ID:ENST00000394790Re-query CCDS DB by Protein ID:ENSP00000378270
Original member Current member NCBI NM_001284194.2 NP_001271123.1 Accepted alive Link to Nucleotide Sequence:NM_001284194.2Link to Protein Sequence:NP_001271123.1Re-query CCDS DB by Nucleotide ID:NM_001284194Re-query CCDS DB by Protein ID:NP_001271123Link to BLAST:NP_001271123.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271123.1 476 Q495W5-2 476 100% 0 0

Chromosomal Locations for CCDS 60558.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 73772334 73773041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73773190 73773815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73775419 73775515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1431 nt):
ATGGCGGCCGGCCCCATTAGGGTGGTGTTGGTCCTTCTAGGGGTGCTCAGTGTCTGTGCAGCCAGCGGCC
ATGGGTCCGTAGCGGAGAGGGAGGCCGGCGGGGAGGCGGAGTGGGCGGAACCGTGGGATGGCGCGGTTTT
CCGGCCGCCCTCGGCGCTGGGCGCAGTGGGGGTGACGCGCAGCTCTGGGACGCCGCGGCCAGGGAGGGAG
GAGGCGGGGGACTTGCCGGTACTGCTGTGGTGGAGCCCAGGGCTATTCCCCCACTTCCCGGGAGACTCGG
AGCGCATCGAGTGTGCGCGCGGCGCGTGCGTGGCGTCCCGGAACCGCCGAGCGCTGAGGGACTCGCGGAC
GCGCGCGCTGCTCTTCTACGGCACAGACTTCCGCGCGTCGGCCGCCCCGCTGCCGCGCCTGGCGCACCAG
AGCTGGGCGCTCCTCCACGAGGAGTCGCCCCTCAACAACTTCTTGCTGAGCCACGGCCCGGGCATCCGCC
TCTTCAATCTTACCTCCACCTTCAGTCGCCACTCGGATTACCCGCTGTCGCTGCAGTGGCTGCCCGGGAC
CGCCTATCTGCGCCGCCCGGTGCCTCCGCCCATGGAACGCGCGGAGTGGCGCCGCCGCGGCTACGCGCCG
CTGCTCTATCTGCAGTCACACTGCGACGTGCCAGCGGACCGGGACCGCTACGTGCGCGAGCTCATGCGCC
ACATCCCGGTAGACTCCTACGGGAAATGCCTGCAGAATCGGGAGCTGCCTACCGCGCGGCTACAGGACAC
AGCCACGGCCACCACCGAGGATCCAGAGCTCTTGGCTTTCTTGTCCCGCTATAAGTTCCACTTGGCCCTG
GAAAATGCCATCTGTAACGACTACATGACAGAAAAACTGTGGCGTCCCATGCACCTGGGCGCTGTGCCCG
TGTACCGCGGTTCTCCCTCTGTGAGGGACTGGATGCCGAACAATCACTCCGTCATCCTGATTGATGATTT
TGAGTCTCCTCAGAAGCTGGCAGAGTTTATTGACTTTCTGGACAAGAATGATGAGGAGTATATGAAATAC
CTGGCATACAAGCAACCTGGGGGCATCACCAACCAATTTCTTCTGGATAGTCTGAAGCATCGGGAGTGGG
GAGTGAATGATCCTTTGCTGCCTAACTACCTCAACGGCTTCGAGTGTTTCGTCTGTGACTACGAACTGGC
TCGGCTGGATGCCGAGAAAGCCCACGCGGCCTCTCCCGGGGACAGCCCCGTCTTTGAGCCCCACATTGCC
CAGCCCTCACACATGGACTGCCCAGTGCCCACACCTGGCTTTGGCAATGTGGAAGAGATTCCTGAGAATG
ACAGCAGTCTTGTCCAAGTTAGAGACCACTGTATCTGCTTAAGATTTCTTTGGCCCCACTCGGAAAAAGG
CAGGACTCATAACTATGCTGCAGTTCCATAA

Translation (476 aa):
MAAGPIRVVLVLLGVLSVCAASGHGSVAEREAGGEAEWAEPWDGAVFRPPSALGAVGVTRSSGTPRPGRE
EAGDLPVLLWWSPGLFPHFPGDSERIECARGACVASRNRRALRDSRTRALLFYGTDFRASAAPLPRLAHQ
SWALLHEESPLNNFLLSHGPGIRLFNLTSTFSRHSDYPLSLQWLPGTAYLRRPVPPPMERAEWRRRGYAP
LLYLQSHCDVPADRDRYVRELMRHIPVDSYGKCLQNRELPTARLQDTATATTEDPELLAFLSRYKFHLAL
ENAICNDYMTEKLWRPMHLGAVPVYRGSPSVRDWMPNNHSVILIDDFESPQKLAEFIDFLDKNDEEYMKY
LAYKQPGGITNQFLLDSLKHREWGVNDPLLPNYLNGFECFVCDYELARLDAEKAHAASPGDSPVFEPHIA
QPSHMDCPVPTPGFGNVEEIPENDSSLVQVRDHCICLRFLWPHSEKGRTHNYAAVP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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